Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151051g00033 ATGGCTGCAAAACTTGAGGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTGTTTTGAACAAGTTGTTTTCACTCGATGTCAACTCAACTCCAATGGCAAGGAAGCTAGCTGACCAGAAGTTTTTTCAGAGGCTGAAGCTAAGTCTCCGTGCAGTTCGCCCCGTTCTTGATGATGCTGAGCAGAAGCAGATCAGAGATGACCAAGAAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTCGATGAACTCTCCACTAAAGCTGCCACTGCTACTACTCCCACTCAAAGGGATCCAGGTAATTATTCTTCCTGGTGTAGCTCTGTTGTTGATTCAATCTTGGAAGATAGTTATGATGGTGAGATAGGGGTGGTGATTAATAAACTGGAGTCTCTTGTTGAAGAGAAAAATGGTCTTGGTCTAAAAGAAGAGCCTGTCAAAGATCTAGAGGACTTGTCATGGAGGATTCAATCGTCTTTGGTTGAAAGTTCTGACATAATTGGAAGGGATAATGACAGGGAGGCCATCATAGAATTGCTGTTAGATGATACTTGTGATGCTAAGATGTCTGTGATCCCCATTGTAGGCATGGGAGGAGTTGGAAAAACTACCTTAGCTCAGTTGGTTTACAATGATGCTAGAGTAGAGGAAAATTTTGACACTAGGGCATGGGTGTGTGTTTCTGAGCAATTTGACATTGTCAAGATTACAAAGACCTTAATAAAAGCAGCAGGTGGTAGTTCTTGTGAGGAGGATGATTTAAATTCACTTCAAAATGAGTTGAAGCGAAAGTTAATGGGGAAGAAATTCTTGATTATTTTGGATGACCTGTGGATTGATAATTCCAATTCCAGACAGTGGAAAACCCTTCAGAAACCTTTTCAATATGGAAAAAAGGGAAGTAAGGTTCTTGTAACAACTCGAAATCATTCTGCTGCTGATGTAGTGAGAACTATTAAAGCATACCACCTCAATTTATTGTCAGAGAAAGATTCTTGGTCACTTTTTGCGAAACGGGTATCCCTTTCTCCTGAGTCTAAGGAGTATTCAACTCTGGAATCTGTTGGTCGAGAACTTGTCAAAAAGTGTAAAGGGCTACCTTTGGCTATAGAATCGCTTGGTGCCTTGTTACGGATCGACTATGACGAGAGGGAATGGGATAGCATACTTAACAGTGAACTTTGGCAAGTTTTTGAAGATCAGAATGACGAGATTATTCCTGCCTTAAGCATGAGCTATCATTATCTTCCTTCAAATCTAAAGCGCTGCTTTGTTTACTGTTCGTTGTTCCCGAAAGACTGTCTATTTGATAAAGATGAGCTAGTCTTGCTATGGATGGCAGAAGAGCTTTTACAGCCAAAAGGAAAAAAGGATCTAGAAGAAATTGGTTGTGAATATTTCAATCAATTAATTGCAAGGTCCTTTTTTCAGTCCTCTAGCACTTATAATAGCTGCTATGTCATTCACGATCTCATGCATGATCTAGCAACAACTCATGCTGGAGAATTCTACTTTAGAGCGGAAAAACATGAACAAGATGTCAAAATCAGCAATAAAACTCGTCATTTATTGCATAATGCAACAGGAAGTTTTCCCTTCTCACAGCTTGTGGCATCTTGTGGCGGGGTAAAAGATGCAAGGACATTTCTTGAAATAAATTTGGGTCGAAAGGATCCTTTCAATATGGAAAATGCTTCTCATATCTTTTTATCACAGTTGAAGTTGTTAAGAGTTTTGTCATTTAATAACTTTCCTCTTGAGTCACTACCAGATTCAATAGGTAACTTGATCCATTTGCGATATTTGAATCTCTCAGATACATGGATAGAGACATTGCCTGAAGAATTGTGTTCTCTGTACAATCTCCAGACATTGAAGTTGAATAACTGTCAACATCTGAAGAAGCTACCCATTAATATGCAAAATCTTGAAAATCTACGCCATCTTGATATTGAAAGAGCTGGAATTGAGGAGATGCCAAAAGGAATGAGCAAGTTGAAGGAATTGCACTTTTTAAGTGACTATGTTGTTGGCAGGCAAGCAGATAATGGAATTAAAGAACTAGGAGCACTTACAAATATTCATGAGTCACTTCGCATTTGCCAATTAGAGAATATCACAGATGGTGCTCAAGCTTTGGAGGCAAGAATTGCTGATAAGAAGCACATTACAGGTCTTTATTTCACATGGTCCTACAACCCCGGCAATATTGATGATTCTCAAGATATATTGAATAATTTAAGGCCTCACACAAACTTGAGAAAGCTATCAATCAATGAGTACAAGGGTCAAACATTTCCAAATTGGTTAGGACATTCTTCCTACAAAAACATGACCAAACTGTACTTGTATGGCTGCACCAACTGTTTAGAGCTTCCTTCACTTGGGCAGCTACCCTCTTTGAAGTGCTTGCGACTCTCCAACTTTTACAGGCTACAATGCGTCGGTGCCAAGTTTTACAAAGAGGATGGATCTTCTTCTGGTGGGGCAGCCTTTCCAGTGCTTGAAACTCTGAGTTTTTATGGAATGGATTGTTGGGAGGAGTGGCTTTCAGTTTCATCTGAGTTGGATGCTTTTCCTCTGCTTAGGGAGCTTAGCCTGACAAATTGCCATGCATTAAGGGGAGATTTGCCTAGTCAACTACCGGCTTTGCAAAGCCTGTGCATTGATCATTGTGGCCAGCTTGATTTTTCTCTCCCAAGAGCTAATGCACTGCTTGAGTTATCAGTTGAAGGACCTCAGCAGGTGGAGGAAGTGTTGAAGGCTATTGCAAGCAACCAACTAAACTGTCTACAATCTTTAAGCATCACAAGTTGTTGGTCGGTCGCATCATTTCCGGTAGGTTCAATGCCTTCTTCATTGCAAAACTTGGTAATCAATGGTTGCCCATATCTAGACTTCCCAATGCCACAGCAGCAGCACAAGTGGTTACAGTCAATATCAATATTGAATAGTTGTTATTCTCTCACTTTCTTCCCCTTGGCTAGCTTTCCGAATCTTAACACACTCAGAATTTCATCCTGTATGAATTTGAGGGCTCTTGGGACATCAGATCCTACTTCTGCTTCAAGTCTCCGCTCTTTAACCATTGAAAGCTGCCCGAGTTTGGGGTCTTTTCCCACACTAAAATTGGTTGCACCCCATCTAGAATATCTCTTGATAAGGGAATGCCCAGAAATTGAGTCCTTTTTTGAAGGGGGTTTGCCACCTAACTTGAGAGAGCTTCAAATCCAGCATTGTGAGAAACTGGTGAAGCACCTAGCATCCATGGACTTGTGTGATCACTATCTTACCCGTCTTGACATTCAACATCCTTATGATAACATCAAATCCTTCCCCATGGATGGTTCCCTGCCGGCCTCCCTTGAGACTCTCAATCTGCGAAGCTTTCCATCTCTAGAAATCTTAGACTGCAAGGGACTTGACCATCTCCAGAGGCTATTGATAGAACGTTGTCCCAGGATGAAGGATGTTGCAGGGGAAAGCTTTCCTGCCTCGCTGTCAATGCTTTGCTTCAATGGACCTTCTCTGCTAAAGGAACGGTTTCAGACAAAGGATGACCTCATTTTATCCAAAATGTCCCACGTCCGAAACATCAGAGTTGACGGTGTATGGATTTCTAAAGGCTTAGTGGCAGGCTGGCAGCCTAGCTTGCTAAAAAATGTGTCAGAATAG 3696 0.4134 MAAKLEGGAYLSSFVDAVLNKLFSLDVNSTPMARKLADQKFFQRLKLSLRAVRPVLDDAEQKQIRDDQEVKKWLVDLQDALYMADDLLDELSTKAATATTPTQRDPGNYSSWCSSVVDSILEDSYDGEIGVVINKLESLVEEKNGLGLKEEPVKDLEDLSWRIQSSLVESSDIIGRDNDREAIIELLLDDTCDAKMSVIPIVGMGGVGKTTLAQLVYNDARVEENFDTRAWVCVSEQFDIVKITKTLIKAAGGSSCEEDDLNSLQNELKRKLMGKKFLIILDDLWIDNSNSRQWKTLQKPFQYGKKGSKVLVTTRNHSAADVVRTIKAYHLNLLSEKDSWSLFAKRVSLSPESKEYSTLESVGRELVKKCKGLPLAIESLGALLRIDYDEREWDSILNSELWQVFEDQNDEIIPALSMSYHYLPSNLKRCFVYCSLFPKDCLFDKDELVLLWMAEELLQPKGKKDLEEIGCEYFNQLIARSFFQSSSTYNSCYVIHDLMHDLATTHAGEFYFRAEKHEQDVKISNKTRHLLHNATGSFPFSQLVASCGGVKDARTFLEINLGRKDPFNMENASHIFLSQLKLLRVLSFNNFPLESLPDSIGNLIHLRYLNLSDTWIETLPEELCSLYNLQTLKLNNCQHLKKLPINMQNLENLRHLDIERAGIEEMPKGMSKLKELHFLSDYVVGRQADNGIKELGALTNIHESLRICQLENITDGAQALEARIADKKHITGLYFTWSYNPGNIDDSQDILNNLRPHTNLRKLSINEYKGQTFPNWLGHSSYKNMTKLYLYGCTNCLELPSLGQLPSLKCLRLSNFYRLQCVGAKFYKEDGSSSGGAAFPVLETLSFYGMDCWEEWLSVSSELDAFPLLRELSLTNCHALRGDLPSQLPALQSLCIDHCGQLDFSLPRANALLELSVEGPQQVEEVLKAIASNQLNCLQSLSITSCWSVASFPVGSMPSSLQNLVINGCPYLDFPMPQQQHKWLQSISILNSCYSLTFFPLASFPNLNTLRISSCMNLRALGTSDPTSASSLRSLTIESCPSLGSFPTLKLVAPHLEYLLIRECPEIESFFEGGLPPNLRELQIQHCEKLVKHLASMDLCDHYLTRLDIQHPYDNIKSFPMDGSLPASLETLNLRSFPSLEILDCKGLDHLQRLLIERCPRMKDVAGESFPASLSMLCFNGPSLLKERFQTKDDLILSKMSHVRNIRVDGVWISKGLVAGWQPSLLKNVSE 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151051g00033 1231 Gene3D - 419 506 IPR036388 -
Stsc151051g00033 1231 PRINTS Disease resistance protein signature 271 285 - -
Stsc151051g00033 1231 PRINTS Disease resistance protein signature 624 640 - -
Stsc151051g00033 1231 PRINTS Disease resistance protein signature 198 213 - -
Stsc151051g00033 1231 PRINTS Disease resistance protein signature 370 384 - -
Stsc151051g00033 1231 Gene3D Ribonuclease Inhibitor 555 935 IPR032675 -
Stsc151051g00033 1231 Gene3D Ribonuclease Inhibitor 974 1180 IPR032675 -
Stsc151051g00033 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 434 IPR027417 -
Stsc151051g00033 1231 SUPERFAMILY L domain-like 495 905 - -
Stsc151051g00033 1231 Gene3D - 15 122 - -
Stsc151051g00033 1231 SMART LRR_typ_2 650 673 IPR003591 -
Stsc151051g00033 1231 SMART LRR_typ_2 603 626 IPR003591 -
Stsc151051g00033 1231 SMART LRR_typ_2 580 602 IPR003591 -
Stsc151051g00033 1231 FunFam Probable disease resistance protein At1g63360 420 505 - -
Stsc151051g00033 1231 FunFam Probable disease resistance protein At1g61300 160 327 - -
Stsc151051g00033 1231 Gene3D - 161 328 IPR027417 -
Stsc151051g00033 1231 Pfam Rx N-terminal domain 14 98 IPR041118 -
Stsc151051g00033 1231 SUPERFAMILY RNI-like 861 1147 - -
Stsc151051g00033 1231 Pfam NB-ARC domain 178 420 IPR002182 GO:0043531
Stsc151051g00033 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 58 877 IPR044974 GO:0006952
Stsc151051g00033 1231 Gene3D - 333 418 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151051g00033 Stsc-Chr151051 193751 198823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151051g00033 593 676 WRKY Transcription Factor Family AT4G12020 34.118 2.30e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151051g00033 - - aip:107625739 2003.41