Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151051g00032 ATGTCTGCGCTCACAATGGCAACTGCAGCATCATCCTTTTTGGGAACACGTTTCATAGAGTCGTACTCCAATTCAGGCAGAGTACAAGCCCGATTTGGGTTTGGTTCCAAGAAGAGCAGCCCTGCAAAGAAGGTTTCTAGACAACCCACCTCTGATAGACCCCTTTGGTACCCTGGTGCAAAGGCGCCTGAGTATTTAGACGGTAGCCTGGTAGGTGACTATGGATTTGATCCCTTCGGCTTAGGAAAACCAGCAGAGTACCTCCAGTTCGACTTGGACTCACTTGATCAGAACTTGGCCAAAAACCTAGCGGGTGATATTATTGGGACAAGGACAGAGGTTTCAGATGTTCAGTCAACACCATTTCAACCGTATAACGAGGTTTTTGGGCTACAGAGGTTTAGGGAGTGCGAACTCATCCATGGAAGATGGGCTATGTTGGCCACACTTGGTGCTCTCACAGTGGAGTGGCTCACCGGTATTACATGGCAAGATGCTGGCAAGGTGGAACTAATTGAAGGGTCACAATACCTAGGTCAACCACTCCCATTCTCACTCACCACATTGATTTGGATTGAAGTTCTAGTGATTGGGTACATTGAGTTCCAGAGGAACGCAGAGCTTGACCCAGAGAAGAGGCTTTACCCAGGTGGCAAGTTCTTTGACCCATTGGGCCTCGCTGAAGACCCAGAGAAGAAGGCCAGACTTCAATTGGCTGAGATCAAGCATGCTCGCCTTGCTATGGTTGCCTTCTTGGGCTTTGCAGTCCAAGCTGCTGTAACTGGCAAAGGCCCACTTAACAATTGGGCTACCCATTTGAGTGACCCACTTCACACTACCATCATTGATAACTTCTCTTCTTGA 864 0.4861 MSALTMATAASSFLGTRFIESYSNSGRVQARFGFGSKKSSPAKKVSRQPTSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDIIGTRTEVSDVQSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELIEGSQYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKARLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151051g00032 287 FunFam Chlorophyll a-b binding protein, chloroplastic 102 287 - -
Stsc151051g00032 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 283 IPR001344 GO:0009765|GO:0016020
Stsc151051g00032 287 Gene3D Chlorophyll a/b binding protein domain 56 287 - -
Stsc151051g00032 287 Pfam Chlorophyll A-B binding protein 62 258 IPR022796 -
Stsc151051g00032 287 MobiDBLite consensus disorder prediction 34 53 - -
Stsc151051g00032 287 SUPERFAMILY Chlorophyll a-b binding protein 47 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151051g00032 Stsc-Chr151051 190001 191610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151051g00032 13 287 Chloroplast and Mitochondria Gene Families AT3G08940 83.696 1.50e-174 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151051g00032 K08915 - rcu:8267514 527.324