Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151050g00046 ATGGCTGAGTCATTTATCTTTAGCATTGCTGAATCACTCGTAGGGAAGCTCGTTTCTCAAGCTTTTGAAAGAGCTTCCCGAGTGGTGGGTGTGTATAATGATATGCTGGGTTTGAAAGACACATTGTCGTTCGTGAAAGCTGTGCTGCTGGATGCGGAGCAGAAGCAGGAGCAGAATCATCAACTGCGCGAATGGCTAAAGCAGCTTAAGTGCGTGTTCTATGATGCCGAAGACTTAATGGATGAAGTCGAGTGCGAGGTAGCGCGAAGGGACTTGATCAAGAAACATGGCAGCACTAAAAGGAAGGTATGCCGATTCTTCTCGAGCTCTAATCCGGTTGCATTCCGATGTAGGATAGCTTATCAGATCAAAGAAATCAAAGATAAGCTAGACAAGGTTGCAGCTGATAGGAATAAGTTTGGCCTTGAGGTCATTCCCTTTGAAAGACGTGTTGTGCATAAGAGAGAAATGACTCACTCTTATGTGAGTGATTTAGATGTGATAGGAAGGGATGATGATAAAAAGCATATCCTTGACCTCTTGTTAAAGAAAATCAATGAGGTTGATGGTAAAAGTGTCTCAGTTGTCTCTATTGTGGGGTTGGGAGGGTTAGGAAAGACCGCTTTAGCCAAGTATGTGTTTAATGATAACACCATAGATGGTGTTTTTCCATTGAAGTTATGGGTGTGTGTTTCCGATGAGTTTGACCTTAAGCAGATCATGATTAAAATCTTGAATTCTGCTCCAACCTCAACTAACCTGGGGAAACTAGAAGACTTAGATGTCGAGCAGCTGCAGAAACATCTCAGAGATGTTCTTGCTGATAAAAAATTCTTACTCGTCATGGACGATGTATGGAATAAAGATCGTGTCAAGTGGGAAGAGTTGAGGAACTTGTTACAAGTTGGTGCCCATGGAAGTAAAGTTCTTGTGACCACACGTAATCGCTTAATTGGTAGCATGATGAGCAATGGTTCCTTCTACAGTTTAGAAGGTCTATCTCACCAAGACTCCATGTCTTTGTTTCTCAAATGGGCATTCCGACAAGGAGTTGAGAAAAACCATCCACAATTGGTGGAAATTGGAGAAGACATTGTCAGAAAATGTGGTGGGCTTCCATTGGCACTGAGAACATTAGGGAGTTCATTGTTCTTAAAATTTGATGTCAAAGAGTGGGAATTTGTCAGGGACAATGAGATTTGGAATTTAGATCAAAAGGAAAGTGATGTCTTGCCTGCACTAAAATTCAGCTACGATCAATTACCTTCATATTTAAAAAGATTTTTTGCATTGTTCTCCCTTTACCCAAAAGACTATATATTTAATACTTCTTTTGGAACTTTACCTTGGGAGGCACTTGGTCTTCTTCCACTACCTAATGCAGGACAAACAGTGGATGATCTAATTAGAGAATGTCTTTGGGAGCTACAATCAATATCATTTCTTGAAGAGTTTGTTGACAGGGGTGGTTTTAATACATTCAAATTGCATGATTTAGTGCATGATCTTGTAATATATGTTGCAAAAGATGAGTTCCAATGTGTAAATTCTCGTAATTCACATATACCTGAGAGTATCCGGCATTTGTCATTTATGGAAAATGAATTGCTAGACAAAGCTTCCATTCCCACTGGTGTTAGAACCATAGTTTTTCCTCAAGGAGGTGAAGGAGCTAACAGTGAAAGGTTTCTGAATACTATATCAACGTACAAATACTTAAGGGTTTTGGACTTGAGTTTTTCTAAATATGAGACCTTGCCTCATGCAATTGGAAAGTTGAAACATTTAAGGTTCCTCTCACTTGAGGACAATTATTACTTGCAGAAGCTCCCTGATTCATTGTGTGAACTCCAAAGTCTGCAAACTTTGATATTTGATGAATGTGTAGATTTGCAAACATTGCCGAAACGATTAGGAAACTTGATTAACCTTCGACAATTGAGAATAACCACAAAGCAATCTGACTTTCCTGAAAAAGAGATTTCAAAATTGACTTCTTTAGAACTTTTGGCTGTCTCTGGTGCGCCTGTGGAGTCTTTGTTCCAAGGGTTAGAACTTGCTAATCTTAAAGCACTGTATCTCCGTGGATGTCTGAGTCTAAAGTCATTGCAACTTGATGCTCAACATATTCCAAACTTGGAGTCTTTGAGTATTGCTTGGTGTCCGGAATTGGAATTGTCTAATGTGCTTGACGACCAAAACTCCAAGTTAAGGTTAAAGTCCCTGACTTTGTTCAATCTCCGAAAGCTGGTGACTTTGCCTCAATGGTTGCAAGGATATTCGTACTCATTGAAGAGCTTGTTTATTATGCATTGTAGCAATTTAGAGGAGCTTCCAGAGTGGCTCACAACAATGACTTATCTCAACAAAATTGTGATAAAAAATTGTCCAGAGTTGATTTCACTCCCTGATGGCATGCATAATCTCATCAACCTTGAGCGTCTGCAAATTATAAATTGCCCTGAATTGTGCAAAAGATGCAAACCACATGAAGGACAGTATTGGCCCCTAATATCTCACATCAAGTATGTTATTATTGATGATGAAAGCATAATATCAATGGAACATTAA 2571 0.3936 MAESFIFSIAESLVGKLVSQAFERASRVVGVYNDMLGLKDTLSFVKAVLLDAEQKQEQNHQLREWLKQLKCVFYDAEDLMDEVECEVARRDLIKKHGSTKRKVCRFFSSSNPVAFRCRIAYQIKEIKDKLDKVAADRNKFGLEVIPFERRVVHKREMTHSYVSDLDVIGRDDDKKHILDLLLKKINEVDGKSVSVVSIVGLGGLGKTALAKYVFNDNTIDGVFPLKLWVCVSDEFDLKQIMIKILNSAPTSTNLGKLEDLDVEQLQKHLRDVLADKKFLLVMDDVWNKDRVKWEELRNLLQVGAHGSKVLVTTRNRLIGSMMSNGSFYSLEGLSHQDSMSLFLKWAFRQGVEKNHPQLVEIGEDIVRKCGGLPLALRTLGSSLFLKFDVKEWEFVRDNEIWNLDQKESDVLPALKFSYDQLPSYLKRFFALFSLYPKDYIFNTSFGTLPWEALGLLPLPNAGQTVDDLIRECLWELQSISFLEEFVDRGGFNTFKLHDLVHDLVIYVAKDEFQCVNSRNSHIPESIRHLSFMENELLDKASIPTGVRTIVFPQGGEGANSERFLNTISTYKYLRVLDLSFSKYETLPHAIGKLKHLRFLSLEDNYYLQKLPDSLCELQSLQTLIFDECVDLQTLPKRLGNLINLRQLRITTKQSDFPEKEISKLTSLELLAVSGAPVESLFQGLELANLKALYLRGCLSLKSLQLDAQHIPNLESLSIAWCPELELSNVLDDQNSKLRLKSLTLFNLRKLVTLPQWLQGYSYSLKSLFIMHCSNLEELPEWLTTMTYLNKIVIKNCPELISLPDGMHNLINLERLQIINCPELCKRCKPHEGQYWPLISHIKYVIIDDESIISMEH 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151050g00046 856 Pfam Rx N-terminal domain 11 98 IPR041118 -
Stsc151050g00046 856 Gene3D Ribonuclease Inhibitor 726 831 IPR032675 -
Stsc151050g00046 856 Gene3D - 10 124 - -
Stsc151050g00046 856 Gene3D Ribonuclease Inhibitor 507 722 IPR032675 -
Stsc151050g00046 856 FunFam Probable disease resistance protein At1g61300 150 326 - -
Stsc151050g00046 856 PRINTS Disease resistance protein signature 369 383 - -
Stsc151050g00046 856 PRINTS Disease resistance protein signature 272 286 - -
Stsc151050g00046 856 PRINTS Disease resistance protein signature 684 700 - -
Stsc151050g00046 856 PRINTS Disease resistance protein signature 195 210 - -
Stsc151050g00046 856 CDD RX-CC_like 2 134 IPR038005 -
Stsc151050g00046 856 PANTHER DISEASE RESISTANCE PROTEIN RP 63 820 IPR044974 GO:0006952
Stsc151050g00046 856 Gene3D - 147 326 IPR027417 -
Stsc151050g00046 856 Gene3D - 332 422 IPR042197 -
Stsc151050g00046 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 431 IPR027417 -
Stsc151050g00046 856 Pfam NB-ARC domain 178 419 IPR002182 GO:0043531
Stsc151050g00046 856 SUPERFAMILY L domain-like 495 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151050g00046 Stsc-Chr151050 264987 268192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151050g00046 193 823 WRKY Transcription Factor Family AT5G45050 23.929 9.97e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151050g00046 - - gmx:100777049 891.723