Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151050g00003 ATGGCCAACACTCCCATCATCCTCTTTCACTTCTTCCAACTGTTGTTACTCACTTCCCACTTCATTTTCCCGCCATGTGCATCTCAATCCTTGGAAGCCAAGGCTCTCCTTGAGTTCAAGAACCATTTGAATGACCCCTTGAATTGGTTGGGTTCATGGAATGAATCAGTGCCTCCATGTGAGTTTGTTGGAGTGAACTGTGATGCATTCTCAGGGAAGGTCACAGAAATCTCAGTAGAGAACAAGTCACTCTCTGGTGTCCTTTTCCCATCAGTCTCAGTTCTTCAGAGCCTGCAAGTGTTGTCACTGCCATCAAACATGATCTCTGGAAAGCTTTCACTGGAAATAAGCAGATGCACCAACCTAAGAGTGCTGAATTTGACAGGAAACCTTATGGTTGGAACCATCCCAGACTTGTCTATGTTGAGGAACCTTGAGGTTCTTGATCTTTCAGCAAATTACTTCACAGGGAGAATCCCAAGCTGGGTTGGGAACCTAACTGTTCTTGTGTCACTGGGCCTTGGGGTGAATGAGTACACTGAGGGTGAGATTCCAGACACACTTGGAAGCCTCAAGAACTTGACTTGGCTCTATCTTGGTGGTTCCCATTTGATAGGAGAGATTCCTGAGTCATTGTATGAAATGAGGGCATTGCAGACACTTGACATTTCAAGGAACAGGATCTCTGGCAAAATCTCAAGATCAATTTCCAAGTTAGAGAATCTGTACAAGCTTGAGCTTTTCAAGAATAACTTGACAGGAACAATCCCAGCTGAGTTTGCAAACCTGACCAATCTGCATGAGGTTGATATTTCTGTGAACCATTTGTATGGTAGTTTACCAGAGGGAATTGGTAATATGAAAAACTTGACTGTCTTTCAAGTATATGATAACAACTTGTCTGGAGAGCTTCCTGCTGGATTTGGGGATATGCAGAATCTTGTTGGGTTCTCAGTTTATAGAAACAGCTTCACCGGGACAATTCCAGAGAATTTTGGCCATTTTTCACCGCTTGAGAGTATCGACATATCTGAGAATCAATTCTCAGGTGATTTCCCAAAGTTCTTGTGTGAAGGAAGGAAGTTGGAGTTTTTGCTTGCATTGCAAAACAATTTCTCTGGGAACTTTCCAGAGACTTATGCCTCATGCAAGTCTCTGTTGAGATTAAGGATTAGTGGGAACCAATTATCTGGGAAAATTCCAGATGGTGTTTGGGCACTTCCAGATGTAAAAATAATTGATTTGGCTTACAATGATTTCAGTGGTGAGATATCATCAGATATTGGGTTTTCTAGCAACTTGAGTGAGTTAGTTTTGACACACAACAAGTTTTCTGGTAAACTTCCATCAGAACTTGGCAATCTGGTGAACCTTGAGAAGCTTTACTTGATCAATAACACTTTCTCTGGTGAAATACCACCTGAAATTGGATCACTGAAGCAACTATCTACTTTGCATCTGGAACAGAATTCATTGACTGGACCAATACCTGCAGAATTGGGTGGTTGTGCAAGGCTAGTAGACTTGAATCTTGCATGGAATTCTCTATCTGGAAACATCCCCCAGTCAATTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGAAACAGACTTTCTGGTTCTATTCCGGATAAGTTAGAGACATTGAAACTGAGCTCTGTGGATTTTTCTCAAAACCTGTTTTCTGGGAGCATCCCATCTGGTCTTCTGATTATTGGAGGGGAGCAAGCTTTTCTTGGGAACAAGGGACTTTGTGTTGAGGAAACTTTTAGGCCTCCCATGAGTCCTGATTTGAGAATCTGTGGTGAAAGGCATGGTCAGAAAAGGCTTTTTGCTGATAAACTTGCCTTGTTCTGTGTCATTGTTTCTATTTTTGCCATTGCTTTAGCTGTGTTGCTGCTCTTGAATCGTGGAAACCTGAAGCATATTTTTGCTGATAAGAACTTGAATGGTCAAGGTGAATCAAGTCAAAAGTGGAAACTTGCATCTTTCCACCAAGTAGATATCGATGCTGACGAAATATGCAAATTGAATGATGATAATTTAATTGGAAGTGGCAGTACAGGGAGGGTGTATCGAGTGGAGTTGCGAAAGAGTCGCGCCACAGTGGCTGTAAAGAAACTAGGCAAAGGTGATAATGTGAAGATTCTAGCTGCAGAGATGGAGATACTGGGGAAAATTAGACATAGGAATATACTTAAGCTCTATGCTTGTTTAGTAAAAGGAGGGTCCAATTTTTTGGTGTTTGAGTTCATGCCAAATGGTAATCTTTTTCGTGCTCTACACAGAGAGATTAAAGATGGGAAGAGAGAGTTGGATTGGAACCAGAGGTATAAGATTGCTCTGGGAGCTGCAAAGGGAATTGCCTATTTACACCATGATTGTTCTCCACCTATTATTCACAGGGATATAAAATCCAGCAACATCTTGCTTGATGAGGATTATGAGCCCAAAATAGCTGATTTTGGTTTTGCAAGGTTGGCAGAAAAATCCAGTGACCAGTTGGGTTATAGCAGCTGTGTTGCTGGTACACATGGTTATATTGCACCAGAACTTGCTTATACACTTGACATCAATGAAAAGAGTGATGTATACAGCTTTGGAGTGGTGCTATTAGAATTGGTTTCAGGAAGAGAACCAATTGAAGAAGATTATGGAGAGGCCAAGGACATTGTATACTGGGTTTTGACTAATCTGAATGACAATGAAAGTGTTGTCAAAATCCTTGATAGCAAGTTGGCATCCAAGTCTGTGAAGGAGATGATAAAAGTGTTGAAGATTGCTATAAAGTGTACAACTAAGCTTCCATCACTGCGCCCAACAATGAGAGAGGTTGTGAACATGCTCACTGATGCTGAGCCTTGCACATTGAAATCTCCTCTCAAAGATGAACAAGAAGCTCCTTTAACAAGTGATTTCCTTTAG 2931 0.4132 MANTPIILFHFFQLLLLTSHFIFPPCASQSLEAKALLEFKNHLNDPLNWLGSWNESVPPCEFVGVNCDAFSGKVTEISVENKSLSGVLFPSVSVLQSLQVLSLPSNMISGKLSLEISRCTNLRVLNLTGNLMVGTIPDLSMLRNLEVLDLSANYFTGRIPSWVGNLTVLVSLGLGVNEYTEGEIPDTLGSLKNLTWLYLGGSHLIGEIPESLYEMRALQTLDISRNRISGKISRSISKLENLYKLELFKNNLTGTIPAEFANLTNLHEVDISVNHLYGSLPEGIGNMKNLTVFQVYDNNLSGELPAGFGDMQNLVGFSVYRNSFTGTIPENFGHFSPLESIDISENQFSGDFPKFLCEGRKLEFLLALQNNFSGNFPETYASCKSLLRLRISGNQLSGKIPDGVWALPDVKIIDLAYNDFSGEISSDIGFSSNLSELVLTHNKFSGKLPSELGNLVNLEKLYLINNTFSGEIPPEIGSLKQLSTLHLEQNSLTGPIPAELGGCARLVDLNLAWNSLSGNIPQSISLMSSLNSLNLSGNRLSGSIPDKLETLKLSSVDFSQNLFSGSIPSGLLIIGGEQAFLGNKGLCVEETFRPPMSPDLRICGERHGQKRLFADKLALFCVIVSIFAIALAVLLLLNRGNLKHIFADKNLNGQGESSQKWKLASFHQVDIDADEICKLNDDNLIGSGSTGRVYRVELRKSRATVAVKKLGKGDNVKILAAEMEILGKIRHRNILKLYACLVKGGSNFLVFEFMPNGNLFRALHREIKDGKRELDWNQRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGFARLAEKSSDQLGYSSCVAGTHGYIAPELAYTLDINEKSDVYSFGVVLLELVSGREPIEEDYGEAKDIVYWVLTNLNDNESVVKILDSKLASKSVKEMIKVLKIAIKCTTKLPSLRPTMREVVNMLTDAEPCTLKSPLKDEQEAPLTSDFL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151050g00003 976 SUPERFAMILY Protein kinase-like (PK-like) 678 951 IPR011009 -
Stsc151050g00003 976 ProSiteProfiles Protein kinase domain profile. 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151050g00003 976 SMART LRR_typ_2 527 551 IPR003591 -
Stsc151050g00003 976 SMART LRR_typ_2 263 287 IPR003591 -
Stsc151050g00003 976 SMART LRR_typ_2 455 478 IPR003591 -
Stsc151050g00003 976 SMART LRR_typ_2 142 166 IPR003591 -
Stsc151050g00003 976 SMART LRR_typ_2 479 503 IPR003591 -
Stsc151050g00003 976 SMART LRR_typ_2 215 239 IPR003591 -
Stsc151050g00003 976 FunFam Probable inactive receptor kinase RLK902 29 182 - -
Stsc151050g00003 976 SMART serkin_6 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151050g00003 976 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 356 - -
Stsc151050g00003 976 SUPERFAMILY RNI-like 256 570 - -
Stsc151050g00003 976 FunFam leucine-rich repeat receptor-like protein kinase TDR 754 962 - -
Stsc151050g00003 976 SUPERFAMILY L domain-like 53 374 - -
Stsc151050g00003 976 Gene3D Transferase(Phosphotransferase) domain 1 758 968 - -
Stsc151050g00003 976 CDD STKc_IRAK 685 952 - -
Stsc151050g00003 976 FunFam Leucine-rich receptor-like protein kinase family protein 669 753 - -
Stsc151050g00003 976 Gene3D Phosphorylase Kinase; domain 1 678 757 - -
Stsc151050g00003 976 FunFam Receptor-like protein kinase HSL1 293 595 - -
Stsc151050g00003 976 Gene3D Ribonuclease Inhibitor 312 596 IPR032675 -
Stsc151050g00003 976 Gene3D Ribonuclease Inhibitor 29 178 IPR032675 -
Stsc151050g00003 976 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Stsc151050g00003 976 FunFam Leucine-rich repeat receptor protein kinase EMS1 208 292 - -
Stsc151050g00003 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Stsc151050g00003 976 Gene3D Ribonuclease Inhibitor 179 240 IPR032675 -
Stsc151050g00003 976 Gene3D Ribonuclease Inhibitor 241 311 IPR032675 -
Stsc151050g00003 976 ProSiteProfiles Leucine-rich repeat profile. 529 552 IPR001611 GO:0005515
Stsc151050g00003 976 ProSitePatterns Protein kinases ATP-binding region signature. 685 709 IPR017441 GO:0005524
Stsc151050g00003 976 Pfam Protein kinase domain 681 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151050g00003 976 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151050g00003 Stsc-Chr151050 28649 31977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151050g00003 21 961 Receptor kinase-like Gene Family AT1G72180 55.310 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc151050g00003 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151050g00003 - - gmx:100789704 1425.61