Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151049g00013 ATGGCGGTACCTTCGAGTTCTGTCAGAGTTCTTCGAAGAGGTTGGCTCCACCGGGCTTCTCCGATAGCGGCTAAACCACCACCGCTCTTAGCAACTGTGCTTCCCTGGGACCGCGATGGCGATGACTTGGCGATGGTGCAAGTCGCGCAAGAAAGAGGGCCAGAAGAGAAGGGTCGGAGGGCAGAGATAGTGGTCTGTGGAGAAAGTGAGATTCATGTGAAGATACCACTTGTCGCAGAGTCGATTGCAGTAGAGGCGCTTCGAAGGGGCTCAATCATGTATGGTAGCAGCAAGAGTGCAGTGAGCCTAGCAATTGTGCCAATCTTGAGTTCGACGCAGGTGATGCTTAGTGGCACCAAGGGAGGACCGCCGTTTGCGGAGCTGCGTTTCCGAATTGAGTCACCAAGTATGAACCTAATTGAAGCGTGCGTTGCAGCTGAAGCAATTGAAGTGTGCGTTGTGGATGAATTGGCATCGTCTCTTCCAACGGCAAGGAATAATGATCTCCTCAGAGGGAAAGAAGTTGGCATCGACAGGAACAGCGGAAGCAACAAGCCTCATACTCATACGAAAAGGACTCATCATGCTAATGAGACCATTATTGCAGTAGAGGCCTTACCTCAAGGTATTAAATTTCAATTTTATATAATTCATGTGAAGGTTGAAGAACTTAACAGAGACTTGATTGGGAAGTGTAAAGAGATAATTCATAAGTGTATTAATGATGCTAAGATGGATAAAAGGGAGGTGCAGGATGTGGTCAATTTTGATAAAACTGTTGCTTATGGTGCTGCAATTCAAGCTACTACCCTTAGTGAAAGTTATAGCATTGTACCAAACATGGTATTAGTTGATGTCATTCCCCTGTTTCTTGGTGTAGCATTTCATGGAGATTTAAGGAGTGTAGTAATCATGCAGAACACTGCCATTCATGGAAATAATTTGCTTGGATTGGTTTTGCTTGAAAAGCTTTCTGCTGTTCCTCAAAACCATCCTATTAATGTTACCTTTGAATTTGATTTTGATGGCATCTTAATTGGCATTGAAGAAGCTGCAAAGTGTCATGTTCATGTCATTCTCATTGGTACAACAAAGCATTCAAATAGCATCAACCTAACACTAAAAGGGTTTGACAGAATTGCTAGGGAAATTAATATTGTTGTTACTGCTGAAGTTGGTCAACCTGTGGCAAGAAACATGAATTCAATTGGCTCCATTGTGGTATTGCATTCCAAGAAATGGGATCCTGGAGGCATGCTTTATTTGTTATACAATATGGGTAGCAGTTAG 1290 0.4349 MAVPSSSVRVLRRGWLHRASPIAAKPPPLLATVLPWDRDGDDLAMVQVAQERGPEEKGRRAEIVVCGESEIHVKIPLVAESIAVEALRRGSIMYGSSKSAVSLAIVPILSSTQVMLSGTKGGPPFAELRFRIESPSMNLIEACVAAEAIEVCVVDELASSLPTARNNDLLRGKEVGIDRNSGSNKPHTHTKRTHHANETIIAVEALPQGIKFQFYIIHVKVEELNRDLIGKCKEIIHKCINDAKMDKREVQDVVNFDKTVAYGAAIQATTLSESYSIVPNMVLVDVIPLFLGVAFHGDLRSVVIMQNTAIHGNNLLGLVLLEKLSAVPQNHPINVTFEFDFDGILIGIEEAAKCHVHVILIGTTKHSNSINLTLKGFDRIAREINIVVTAEVGQPVARNMNSIGSIVVLHSKKWDPGGMLYLLYNMGSS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151049g00013 429 Gene3D - 232 254 - -
Stsc151049g00013 429 PANTHER HEAT SHOCK PROTEIN 70KDA 191 254 IPR013126 GO:0005524|GO:0140662
Stsc151049g00013 429 SUPERFAMILY Actin-like ATPase domain 195 270 IPR043129 -
Stsc151049g00013 429 Pfam Hsp70 protein 254 311 IPR013126 GO:0005524|GO:0140662
Stsc151049g00013 429 PRINTS 70kDa heat shock protein signature 254 274 - -
Stsc151049g00013 429 PRINTS 70kDa heat shock protein signature 280 299 - -
Stsc151049g00013 429 MobiDBLite consensus disorder prediction 175 194 - -
Stsc151049g00013 429 Gene3D Actin; Chain A, domain 4 192 231 - -
Stsc151049g00013 429 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 279 345 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151049g00013 Stsc-Chr151049 98711 100123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151049g00013 189 345 Calmodulin-binding Proteins AT3G12580 33.486 2.62e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151049g00013 K03283 - ccaj:114916772 107.071