Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00042 ATGCCGGGCAAGAGGATGATGGATTTTAGCAATTGCTACCCGGAAGATCCTCATTCACTGAACTTTGGTGCTCAGAGAGGATTTCTGAAAGTATTGAAATCAGGATTGAAAGAAACATTGTTCCCTGACGATCCCTTCAGGGAGATCAAGAAAGAGGATAAGCCATTGTTTAAGGCTATAAAATGGCTTCAGTACTTGGTTCCAATCTTCCAGTGGCTGCCCACATACACTTGGAAGTTGTTCATCTCCGACTTCTTCGCCGGCCTCACCGCCACCAGTATTGCCGTTCCCCAAGCCATCAGCTATGCCAAACTTGCTGGTCTTCATCCCATTATTGGACTCTATACATGTTTTGTGCCACCAATTGTGTATGCAATATTTGGGAGCTCAAGGCACTTATCAGTGGGGCCAATAGCATCAGCATCGTTGCTTATATCTCAAACAATTTCAACGGTGGTAAGACCGGAAGACGACCCCGTATTGTACCTTCACTTGGTTTTGACAACTACATTTGTTGCTGGCCTCTTCCAAGCTTGTTTGGGTGTCCTCAGGTTGGGTATATTAGTGGATTTGTTATCGCATTCAACCATCACAGGTTTCATGGGAGGAGCAGCAGTAATGCTTACCCTCCAACAATTGAAGGGCATGTTCGGCTTGAAACATTTTGCGCATAAAACTGGCGTCATAACTGTACTCCAGTCCATATGGACCTATAGACATGAGATAAGGTGGGAAACCACCGTTATGGGTTTGATCTTCCTTGCTTACCTTCAGATTACGAAACACCAGAGGAATAGAAACCGGAAACTCTTTTGGCTATCAGCTATGGCTCCAATGACAACTGTAATAGTGGGTGGCGTTTTCACTTACCTCGTCAATGGAAAACGACATGGAATTCAAACGGTCGGTCACCTGAGCAGAGGAATAAATCCTCTGTCCATCAAAGCCTTGAAATTTGACAGCACGTATTTAGCACCGGTTCTGAGAGCTGGTTTTATCACGGGTGTTTTATCCATGGCGGAGGGAATAGCAATCGGAAGAAGCTTTGCTGTGGTTGAAAATACTCCTCATGATGGCAACAAAGAGATGATAGCTTTTGGTCTCATGAACATGTGTGGTTCTATTACTTCATGTTACTTGACTACTGGACCATTTTCGAAAACGGCAGTGAATTACATAGCAGGGTGTAAGACAGCGATGTCAAACTTAGTACAAGCATTCCTAGTAGCATTCACACTTGAGTTTTTGGCTCCTCTTTTTGGTTACACACCTCTCGTTGTTCTATCAGCAATCATCATCTCTGCAGTGCTGGGCTTCCTCAATTATGCAGAAGTTGTTCGTCTTTACAAAGTTGACAAGTTTGATTTCGTCATTTGCATGGCTGGTTTCTTCGGAGTAATCTTCATAGCCTTGGACGTTGGCCTCATGATCTCTGTGGGTCTTAGCATTCTTAGAGCACTATTATATGTGGCAAGGCCTGATTCATGTAAGCTTGGAAAGTTACCTGAATTGGGTTTGTATCGAGATGCTGAACAATACACAGTTTCAACACTCCCAGGGATTCTAATTGTACAACTTGGTTCTCCCATGTACTTTGCAAATTCTAATTACGTCAAAGAAAGAATTATGAGGTACATTCGATGTGAAGAAGACTCTACTGGAGTTACTGTTGAGCAGATCATACTGGATTTGTCAGGAGTGACATCCATTGACACCACTTCTCTTGAAGGATTGTGGGAAACAAATAAAATTATTGAAAATAATGGAATTCAGTTAAAATTTGTAAACCCAAGGATAGAGGTAGTGGAGAAAATGATGGCAGCAAAGTTTGTTTCGAGGATTGGGAAGGAATCATTTTTCCTTACACTAGAGGATGCAGTGAAGGCAAGTCAAATAGCACTTCGCAAATCAAGGGCAAGCAATTCTGAAGATGGAATGATTAAAGGAACAACAATTCATCAATCTGCTGTTGATTCTTGCTAG 1983 0.4251 MPGKRMMDFSNCYPEDPHSLNFGAQRGFLKVLKSGLKETLFPDDPFREIKKEDKPLFKAIKWLQYLVPIFQWLPTYTWKLFISDFFAGLTATSIAVPQAISYAKLAGLHPIIGLYTCFVPPIVYAIFGSSRHLSVGPIASASLLISQTISTVVRPEDDPVLYLHLVLTTTFVAGLFQACLGVLRLGILVDLLSHSTITGFMGGAAVMLTLQQLKGMFGLKHFAHKTGVITVLQSIWTYRHEIRWETTVMGLIFLAYLQITKHQRNRNRKLFWLSAMAPMTTVIVGGVFTYLVNGKRHGIQTVGHLSRGINPLSIKALKFDSTYLAPVLRAGFITGVLSMAEGIAIGRSFAVVENTPHDGNKEMIAFGLMNMCGSITSCYLTTGPFSKTAVNYIAGCKTAMSNLVQAFLVAFTLEFLAPLFGYTPLVVLSAIIISAVLGFLNYAEVVRLYKVDKFDFVICMAGFFGVIFIALDVGLMISVGLSILRALLYVARPDSCKLGKLPELGLYRDAEQYTVSTLPGILIVQLGSPMYFANSNYVKERIMRYIRCEEDSTGVTVEQIILDLSGVTSIDTTSLEGLWETNKIIENNGIQLKFVNPRIEVVEKMMAAKFVSRIGKESFFLTLEDAVKASQIALRKSRASNSEDGMIKGTTIHQSAVDSC 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00042 660 SUPERFAMILY SpoIIaa-like 512 629 IPR036513 -
Stsc151048g00042 660 CDD STAS_SulP_like_sulfate_transporter 519 623 - -
Stsc151048g00042 660 NCBIfam sulfate permease 68 626 IPR001902 GO:0016020|GO:0055085
Stsc151048g00042 660 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Stsc151048g00042 660 Pfam STAS domain 513 626 IPR002645 -
Stsc151048g00042 660 ProSiteProfiles STAS domain profile. 511 630 IPR002645 -
Stsc151048g00042 660 PANTHER SULFATE TRANSPORTER 33 632 IPR001902 GO:0016020|GO:0055085
Stsc151048g00042 660 Gene3D STAS domain 492 633 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00042 Stsc-Chr151048 280471 285731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00042 18 638 Inorganic Solute Cotransporters AT5G19600 57.235 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00042 K17471 - gmx:100789107 854.358