Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00040 ATGGTGAAATGGGCAGAGCTTATTGAAGAAAATGGAGAAGAGTTAGCGGCATTGGACACCATCGATGCTGGTTTGCTATACCAATTCTCCAAGTTTGTGATTCTTACAGGAGCAACGGAATCGTTCCGCTACTATGCTGGTGCTGCTGACAAGATTCACGGGGAGGTGTTGAAGTGCTCTGGCCAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATGTCCCCTTTGGAAATTTCTACACCAAGGTTGCACCTTCCATGGCTGCTGGCTGCACCATGGTCCTCAAACCCGCTGAACAGACCCCTCTCTCTGCTCTCTTTGCTGCTCATCTAGCTAAGCTGGCTGGAGTCCCGGACGGGGTGCTAAATGGAGAAGTATGTGTGGCAGGTTCACGTGTGTACGTTCAAGAAGGCATATATGATGAACTTGAGAAGAAGTTGGTAGAGAAGGCAAAAGCTTGGGTTGTTGGGGATCCTTTTGATCCTAAAACTAACCAAGGGCCTCAGGCTGACAAGAACCAGTTTGATAAAATTCTTTCGTATATTGAGCATGGAATGAAAGAGGGAGCTACCCTTTTGACCGGAGGTAAATCCATCGACACCAAGGGCTATTTCATTGAACCTACAATTTTCACTAATGTTAAGGAGGACATGCGTATAGCCCAGGATGAAATATTTGGCCCCGTCATGGCGTTAATGAAGTTTAAGACAATTGAGGAAGCAATTAAGAGTGCAAACAATACAAGATACGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATCAATTGCTATTTGGTTCTTGGGAGTGACATTCCTTTTGGAGGTTTCAAGATTAGTGGGTTTGGTGGAAAGGATTTCGGTTTGGATGCACTTTACAAGTACATGCAAGTTAAATCTGTCGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1011 0.45 MVKWAELIEENGEELAALDTIDAGLLYQFSKFVILTGATESFRYYAGAADKIHGEVLKCSGQFHAYTLMEPIGVVGHIIPWNVPFGNFYTKVAPSMAAGCTMVLKPAEQTPLSALFAAHLAKLAGVPDGVLNGEVCVAGSRVYVQEGIYDELEKKLVEKAKAWVVGDPFDPKTNQGPQADKNQFDKILSYIEHGMKEGATLLTGGKSIDTKGYFIEPTIFTNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGIVWINCYLVLGSDIPFGGFKISGFGGKDFGLDALYKYMQVKSVVTPIYNSPWL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00040 336 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 132 326 - -
Stsc151048g00040 336 FunFam Aldehyde dehydrogenase3 118 294 - -
Stsc151048g00040 336 SUPERFAMILY ALDH-like 2 335 IPR016161 GO:0016491
Stsc151048g00040 336 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 130 IPR016162 GO:0016491
Stsc151048g00040 336 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 131 292 IPR016163 GO:0016620
Stsc151048g00040 336 Pfam Aldehyde dehydrogenase family 132 326 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00040 Stsc-Chr151048 266801 268496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00040 133 336 Aldehyde Dehydrogenase Gene Family AT3G24503 67.647 3.32e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00040 K12355 - gmx:100783920 340.117