Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00039 ATGGCTACAAACGGTGTCTCTGATTCCTTATTCAAGATGCCCACCATCAAGTTTACTAAGCTCTTCATCAATGGACAGTTTGTTGATTCCATTTTAGGAAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGTGATAGCGAAGATCAGCGAGGGAACTAAAGAAGACGTGGATGCTGCTGTTGCGGCGGCGCGTGACGCATTTGACAATGGCCCATGGCCCCGCATGTCCGGAGCTGTGCGTACCTTTTCTTTTTCTATCTTTTTTCTATCATTTTTCTAG 285 0.4491 MATNGVSDSLFKMPTIKFTKLFINGQFVDSILGKTFETIDPRTGEVIAKISEGTKEDVDAAVAAARDAFDNGPWPRMSGAVRTFSFSIFFLSFF 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00039 94 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 82 - -
Stsc151048g00039 94 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 10 84 IPR016162 GO:0016491
Stsc151048g00039 94 Pfam Aldehyde dehydrogenase family 32 82 IPR015590 GO:0016491
Stsc151048g00039 94 SUPERFAMILY ALDH-like 11 83 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00039 Stsc-Chr151048 263452 264915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00039 12 82 Aldehyde Dehydrogenase Gene Family AT3G24503 76.056 3.44e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00039 K12355 - qsa:O6P43_007942 120.938