Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00037 ATGGCTACAAATGGTGTCTCTGATTCCTCATTTAAGATGCCCACCATCAAGTTTACTAAGCTCTTCATCAATGGACAGTTTGTTGATTCCATTTCAGGAAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGTGATAGCGAAGATCAGCGAGGGAACTAAGGAAGACGTGGATGCTGCTGTTGCGGCGGCGCGTGACGCATTTGACAATGGCCCATGGCCCCGCATGCCCGGAGCTGAGAGGGCAAAAATTATGGCGAAATGGGCAGAGCTCATAGAAGAAAATGGAGATGAGCTAGCGGCATTGGACACCATTGATGCTGGTTTGCTATACCAATTCACTAAGTTTGCGGTTCCTACAGGAGCAGCGGGATCGTTGCGCTTCTATGCTGGTGCTGCTGACAAGATTCATGGGGAGGTGCTGAAGTGCTCAGGCCAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATGTCCCCTTTGGAAATTTCTACACCAAGGTTGCACCTTCCATGGCTGCTGGCTGCACCATGGTCCTCAAACCAGCTGAACAGACCCCTCTCTCTGCTCTCTTTGTTGCTCATCTAGCTAAGCTGGCTGGAGTCCCGGACGGGGTGCTAAATGTAGTACCCGGATTTGGGCCAACTGCGGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGGAGAAATATGTGCTGCAGGTTCTCGTGTGTACGTTCAAGAAGGGATATATGATGAACTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCATGGGTTGTTGGGGATCCTTTTGATCTTAAAACTAACCAAGGGCCTCAGGCTGACAAGAACCAATTTGATAAAATTCTTTCGTATATTGAGCATGGAATGAAAGAGGGAGCTACCCTTTTGACCGGAGGTAAATCCATCGACACCAAGGGCTATTTCATTGAACCTACAATTTTCACTAATGTTAAGGAGGACATGCGTATAGCCCAGGATGAAATATTTGGCCCCGTCATGGCGTTAATGAAGTTTAAGACAATTGAGGAAGCAATTAAGAATGCAAACAATACAAGATACGGGTTAGCAGCGGGGATAGTGACAAAAAACATAGACACAGCAAACACAATGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATCAATTGCTATTTGGTTCTCGGGGGTGACATTCCTTTTGGAGGGTTCAAGATTAGTGGATTTGGTGGAAAGGATCTCGGTTTGGATGCACTTTACAAGTACATGCAAGTTAAATCTGTTGTAACTCCCATTTACTGGCTTTGA 1320 0.4614 MATNGVSDSSFKMPTIKFTKLFINGQFVDSISGKTFETIDPRTGEVIAKISEGTKEDVDAAVAAARDAFDNGPWPRMPGAERAKIMAKWAELIEENGDELAALDTIDAGLLYQFTKFAVPTGAAGSLRFYAGAADKIHGEVLKCSGQFHAYTLMEPIGVVGHIIPWNVPFGNFYTKVAPSMAAGCTMVLKPAEQTPLSALFVAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKGEICAAGSRVYVQEGIYDELEKKLVEKAKAWVVGDPFDLKTNQGPQADKNQFDKILSYIEHGMKEGATLLTGGKSIDTKGYFIEPTIFTNVKEDMRIAQDEIFGPVMALMKFKTIEEAIKNANNTRYGLAAGIVTKNIDTANTMSRSIRAGIVWINCYLVLGGDIPFGGFKISGFGGKDLGLDALYKYMQVKSVVTPIYWL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00037 439 FunFam Aldehyde dehydrogenase, mitochondrial 8 252 - -
Stsc151048g00037 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 237 IPR016162 GO:0016491
Stsc151048g00037 439 SUPERFAMILY ALDH-like 11 436 IPR016161 GO:0016491
Stsc151048g00037 439 FunFam Aldehyde dehydrogenase3 229 400 - -
Stsc151048g00037 439 Pfam Aldehyde dehydrogenase family 238 432 IPR015590 GO:0016491
Stsc151048g00037 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 403 432 IPR016162 GO:0016491
Stsc151048g00037 439 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 10 238 - -
Stsc151048g00037 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 238 402 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00037 Stsc-Chr151048 250294 254059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00037 9 437 Aldehyde Dehydrogenase Gene Family AT3G24503 60.041 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00037 K12355 K00128 qsa:O6P43_007941 539.265