Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00036 ATGACTGAACTCACTAATAACGGCCGTGACTACTCCTCCGTCACCGTCAAATTCACCAAGCTATTCATCAATGGAAACTTTCTTGATTCAGTTTCAGGGAAGACGTTTGAGACAATAGATCCGAGAACAGGAGAGGTGATAACAAGAATTAGTGAAGGAACCAAAGAAGACATAGATATTGCTGTTAAGGCTGCACGTCACGCATTTGACTTTGGTCCATGGCCTCGCTTGCCTCCTTCTGAGAGAGCAAAGATCATGATGAAATGGGCAGAACTAATCGACGAAAACACAGAAGAACTTGCGGCACTAGATGCCATTGATGCTGGAAAATTGTATCACATGTGCAAGGCTGTGGACATTCCCACAGCATCAAACACTCTGCGCTACTATGCTGGTGCTGCTGACAAAATTCATGGTGAAGTGTTAAAGATGTCCGGGCAGTTCCATGCATACACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCATGGAATTTCCCAACCACCATGTTCTTCCTTAAAGTTAGCCCTTCCTTGGCTGCAGGCTGCACCATCATCCTCAAGCCTGCAGAGCAAACACCACTCTCTGCTTTGCTTTATGCTCATCTAGCCAAACTGGCTGGAGTCCCTGATGGAGTGATTAATGTTGTACCCGGATTCGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGTTTCACTGGTTCAACAGAAGTTGGGCGTGAAATAATGGAAGCTGCAGCAAAGAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAATCACCCCTCATTATCTTTGATGATGCTGATATTGACAAAGCTACTGACCTTGCTCTCTTGGGCATCCTATTTAACAAGGGAGAAGTCTGTGTTTCAAGTGCGCGTGTGTTTGTTCAAGAAGGGATCTACCAGGAATTCGAGAAGAAATTGGTTGACAAGGCAAAAGCATGGGTTGTTGGGGATCCTTTTGACCCTAACTCTCAGCAAGGACCTCAGGTTGACAAGAACCAATTTGAAAAAGTCCTTTCCTACATTGAGCATGGAAAGAGACAAGGAGCTACCCTATTAACTGGGGGTAAAACACTGGGAAACAAGGGCTATTACATTCAACCAACAATTTTTTCCAACGTGAAGGAGGACATGCTTATAGCACAAGATGAAATATTCGGCCCTGTCATGGCACTCAAGAAGTTCAAGACGATCGAGGAAGCAATTAAGAGCGCAAACAACACAAGATATGGGTTAGCAGCAGGGGTAGTGACAAAGAACATAGACACAGCAAACACAATGTCAAGGTCCATTAGAGCAGGCACTATTTGGATCAATTGCTACTTTGCATTTGGGGATGATGTCCCTTTTGGAGGATATAAGATGAGTGGATTTGGAAAAGATTCTGGATTGGATGCACTTTACAAGTACTTACAAGTTAAATCTGTTGTCACACCTGTTTACAATTCTCCTTGGCTTTGA 1500 0.4387 MTELTNNGRDYSSVTVKFTKLFINGNFLDSVSGKTFETIDPRTGEVITRISEGTKEDIDIAVKAARHAFDFGPWPRLPPSERAKIMMKWAELIDENTEELAALDAIDAGKLYHMCKAVDIPTASNTLRYYAGAADKIHGEVLKMSGQFHAYTLMEPIGVVGHIIPWNFPTTMFFLKVSPSLAAGCTIILKPAEQTPLSALLYAHLAKLAGVPDGVINVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREIMEAAAKSNLKQVSLELGGKSPLIIFDDADIDKATDLALLGILFNKGEVCVSSARVFVQEGIYQEFEKKLVDKAKAWVVGDPFDPNSQQGPQVDKNQFEKVLSYIEHGKRQGATLLTGGKTLGNKGYYIQPTIFSNVKEDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGVVTKNIDTANTMSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDSGLDALYKYLQVKSVVTPVYNSPWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00036 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 14 489 - -
Stsc151048g00036 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Stsc151048g00036 499 Pfam Aldehyde dehydrogenase family 30 489 IPR015590 GO:0016491
Stsc151048g00036 499 FunFam Aldehyde dehydrogenase, putative 461 487 - -
Stsc151048g00036 499 SUPERFAMILY ALDH-like 13 495 IPR016161 GO:0016491
Stsc151048g00036 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Stsc151048g00036 499 FunFam Aldehyde dehydrogenase3 269 458 - -
Stsc151048g00036 499 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 23 289 - -
Stsc151048g00036 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00036 Stsc-Chr151048 237783 249378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00036 16 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.103 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00036 K12355 - gmx:100811540 870.537