Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00022 ATGGCTGCACTCGCTGTGGCCAGTATCATTCTTGTGCTGTTTACCGTTTTCTTCGTCATTTCTTACTGGAAAAAGAGAGGAAAGAAGAAGAAGAAGAAGAGTAATAGTGATGATGGAATTGGAAAAATAATAATATCAAAGAGGAGAATATTCAGGTATGAGTTGCTGGAACGCGCAACGAATGGGTTCTGTGATGCGAACAAGGTTGGAGAAGGTGGATTTGGTTATGTCCACAGAGGGGTTCTTCTGGACGGCAAGCAGGTTGCCATCAAACAGCTCAAGGCAGGGAGTAGGCAGGGTGAGCGTGAGTTTCAAGCTGAAGCTGACATAATCACCACCGTTTATCACAAGAATCTTGTTTCTTTGGTTGGATACTGCATCTCCGCCACCCACAGGATCCTTGTCTATGAATTTGTTCCTAACAATACATTGCACTTCCATTTACATGGGGAAGGACCTACTATAGATTGGCCTGCAAGGATGAAGATTGATGTGGGTGCAGCAAAAGGACTGGCATATCTTCACGACGATTGTCATCCCAATATCATCCATCGAAATATCAAAGCTGCCAACATCCTCCTTGATTTTAACTTTCAAGTAAAGGTATACTATGTTGTTGCCGTTGGTGTTTGGTTCAGATGTGTTTTTGAGGTTGCTGATTTTGGGCTTGCTAAGTGTTGTTGCCCTGATGTGACTAGCGCTGATGTTTACACTAGAGTCATGGGAACAGCAATGCCTTTGCTGAGACGTGCTTTACAAAGTAATGATTTTGATGATGTGGTTGATCCAAGGCTCCAGAATCATTATCAACCCTCTGAGATGGCTCGCATGGTGGCATGTGCAGCCGCTTCCTTACGTTATTCAGCTGATCATAGACCATCCATGGCACAGATAGTTTGTGCACTGAAAGGAGACGCATCTCAAGTTGCTGAGTGCACTTCTAATGTAAGCTCAGATTCTGAGGCCGCACAGTGCAAGCAAGACATGATCAAAATGTTTACAAGAATGACTTGTGAGGTTACTGGTTAA 1029 0.4383 MAALAVASIILVLFTVFFVISYWKKRGKKKKKKSNSDDGIGKIIISKRRIFRYELLERATNGFCDANKVGEGGFGYVHRGVLLDGKQVAIKQLKAGSRQGEREFQAEADIITTVYHKNLVSLVGYCISATHRILVYEFVPNNTLHFHLHGEGPTIDWPARMKIDVGAAKGLAYLHDDCHPNIIHRNIKAANILLDFNFQVKVYYVVAVGVWFRCVFEVADFGLAKCCCPDVTSADVYTRVMGTAMPLLRRALQSNDFDDVVDPRLQNHYQPSEMARMVACAAASLRYSADHRPSMAQIVCALKGDASQVAECTSNVSSDSEAAQCKQDMIKMFTRMTCEVTG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00022 342 SUPERFAMILY Protein kinase-like (PK-like) 41 302 IPR011009 -
Stsc151048g00022 342 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 244 335 IPR047117 -
Stsc151048g00022 342 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Stsc151048g00022 342 ProSiteProfiles Protein kinase domain profile. 63 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151048g00022 342 Gene3D Phosphorylase Kinase; domain 1 23 138 - -
Stsc151048g00022 342 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 41 138 - -
Stsc151048g00022 342 Pfam Protein tyrosine and serine/threonine kinase 67 227 IPR001245 GO:0004672|GO:0006468
Stsc151048g00022 342 Gene3D Transferase(Phosphotransferase) domain 1 246 318 - -
Stsc151048g00022 342 Gene3D Transferase(Phosphotransferase) domain 1 139 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00022 Stsc-Chr151048 136416 137908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00022 34 336 Trihelix Transcription Factor Family AT5G38560 41.176 1.68e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Stsc151048g00022 PK_Tyr_Ser-Thr 4.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00022 - - ahf:112743291 350.517