Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151048g00010 ATGAATAGAGGTGGTGGTGGTGGTGGTGGTGTGGTTGAGCAAATCATGGGTGCCGGGAACCCTAACTGCTGGAACTCATCTTCTGTTTCTCCTGATTTCATGCCATACTCCTCCACTACTTCTTCTTCTTCTTCTTCATACACAAACTTTCTTCTGAATCCACCACCACCATATGCACCTCATCCTCCTCCTCCCGCTTCTTCTCTTCCTTTGTTCACTTCTAATAACTGGCATGGCGGCCAAGAGCATGAGCATGAGCATCACAATAATAATACTAATCCAGAGCTTCCCGACTACTCATGGACTCACCTAATCATGAATGGAGTGGTGGGAGAAGAGAATGGTAGAGGAGGTATCATATGGCAGCAGCATGCATCTGATGTGAAGCAAGAAAGTTCGGAAAAGAGCAGCTTTGTGTACGGTGATGATGATGGAAGTGCAGGGAAACCTAACTGGTCTCATCACCATCAGATGTTACTGCTTCCTCCTAATAATAATAATGCTATTTCTTCATCACCCAAATCATCATCATCTCTCACCCTCACCACCAGCTTCTTGGACTTCTCCAACTCCCACACTCAGCCCACTCCTCCTCCACCTCCACCTTCCGCCGAGTGCAATAGCAACACATCAGGTGGTGGAGCACCGAAAAAAGCTAGGGTTCAACAGTCCTCTTCTTCTTCCTCGTCGACATTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATAGCAGCTCTCCATCAACTCGTTTCCCCATTTGGAAAGACTGACACTGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCTTACTTGGCCAATAATAATGGATCACCAAGCATCAAGCACCAACATTCTGTTCAAGGAGAGAAGAATTGTTTATTCCCTGAAGACCCCGGTCAGCTGCTGAATGAAAACTGCTTGAAGAAGAGGAAAGCAGCTAGTCATCAGCAGGAGGGCTGCCACCGTGAAGAAGAAGGAAAGAAGGACCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTACAAGTTGGAAGTGAGAATGGAGCTGATTATTGGGCTCCTGCTTTTGGTACTGGAGGATTTCGATAG 1137 0.4661 MNRGGGGGGGVVEQIMGAGNPNCWNSSSVSPDFMPYSSTTSSSSSSYTNFLLNPPPPYAPHPPPPASSLPLFTSNNWHGGQEHEHEHHNNNTNPELPDYSWTHLIMNGVVGEENGRGGIIWQQHASDVKQESSEKSSFVYGDDDGSAGKPNWSHHHQMLLLPPNNNNAISSSPKSSSSLTLTTSFLDFSNSHTQPTPPPPPPSAECNSNTSGGGAPKKARVQQSSSSSSSTFKVRKEKLGDRIAALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLANNNGSPSIKHQHSVQGEKNCLFPEDPGQLLNENCLKKRKAASHQQEGCHREEEGKKDLRSRGLCLVPVSCTLQVGSENGADYWAPAFGTGGFR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151048g00010 378 MobiDBLite consensus disorder prediction 124 234 - -
Stsc151048g00010 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 223 272 IPR011598 GO:0046983
Stsc151048g00010 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 284 IPR036638 GO:0046983
Stsc151048g00010 378 FunFam transcription factor bHLH68 isoform X1 230 283 - -
Stsc151048g00010 378 CDD bHLH_AtbHLH_like 231 280 IPR045239 -
Stsc151048g00010 378 MobiDBLite consensus disorder prediction 54 69 - -
Stsc151048g00010 378 MobiDBLite consensus disorder prediction 206 233 - -
Stsc151048g00010 378 MobiDBLite consensus disorder prediction 158 192 - -
Stsc151048g00010 378 Gene3D - 222 287 IPR036638 GO:0046983
Stsc151048g00010 378 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 359 - -
Stsc151048g00010 378 MobiDBLite consensus disorder prediction 54 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151048g00010 Stsc-Chr151048 66617 71017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151048g00010 211 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 53.103 4.15e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151048g00010 - - adu:107478609 408.297