Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151047g00032 ATGGAAGAGCCTGTTGTGGTTAACAAAGGCGAGGAGCCTCTAGATTTGCCGCCGGGTTTCAGGTTCCACCCGACTGACGAAGAAATCATCACTTGTTACCTGACGGAGAAGGTCATGAACAGCAGCTTCAGTGCAACTGCCATAGGCGAAGCCGATTTAAACAAATCCGAACCATGGGATTTACCAAAGAAAGCGAAGATGGGGGAGAAGGAGTGGTACTTCTTCTGTCAGAAAGACAGGAAATACCCGACAGGGATGAGGACGAATAGAGCGACGGATTCCGGTTACTGGAAGGCAACCGGAAAAGACAAGGAGATTTTCAAAGGGAAAGGGAATCTGGTTGGGATGAAGAAGACGCTTGTGTTCTACAAAGGTAGAGCTCCCAAGGGTGAAAAGACCAATTGGGTCATGCATGAGTTCAGATTAGAAGGCAAATTTGCTAATTATAACCTCCCCAAGGCTGCAAAGGATGAATGGGTTGTGTCAAGGGTTTTTCACAAGAACACAGATGTAAAGAAGAGTATTACTACTACTACTACCCCATCATCATCATCATCAATAATTCCTGGGCTATTGAGGATGAACTCAATAGGTGATGATCTTCTAGATTGCTCCACACTACCACCTCTGATGGACCCTCACCCTCACCCATCATCTGGCGATGAATTCAAAGGCATCATCAACAACCCTCTAAAATCAGACGGCTATTATTTCCCCACCTTCTCATCATCACTCAACAACAGCCATCAGATCCTCATCAAGCCTGAAGAACAACAACACAACAGAAGCAACGAAATCGCCGTCACCAATTACCAGATTCCCAATTTCAACAACAACACACTCTCTTCTCATCACCACCACAATTTGTTCTCATCATCATCATCAGATAATAATAATAATAATAATTATCATAGCTCGTGGCCAAGTTATTATGGGGTCAACAACATCAGCAACAATCTGAGCCATCAAAGTAGTCATCATCATCATCATCAACATGATGATATGCTACTAAGAGCAATCGCATCAAAGAATTATAACAACGGCAACGGCAACGGCAGCAGTGGCGGCGGCGAGTGCAAGGTGGAGCAGTTCTCGTCCGGCAACCAATCGGTGGTGAGCGTTTCGCAAGAGACGGGGCTGAGCAACGACAGAAACACGAATGACACGTCATCGGTGGTTTCGAAGCAGCAGCATAATAATAACAAGACATTGTACGAGGATCTTGAAGGTCCTTCTTCATCAGTTGCACCTCTCTCAGATTTGGAATGCCTCTGGGATGCCTACTGA 1287 0.4538 MEEPVVVNKGEEPLDLPPGFRFHPTDEEIITCYLTEKVMNSSFSATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATDSGYWKATGKDKEIFKGKGNLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLEGKFANYNLPKAAKDEWVVSRVFHKNTDVKKSITTTTTPSSSSSIIPGLLRMNSIGDDLLDCSTLPPLMDPHPHPSSGDEFKGIINNPLKSDGYYFPTFSSSLNNSHQILIKPEEQQHNRSNEIAVTNYQIPNFNNNTLSSHHHHNLFSSSSSDNNNNNNYHSSWPSYYGVNNISNNLSHQSSHHHHHQHDDMLLRAIASKNYNNGNGNGSSGGGECKVEQFSSGNQSVVSVSQETGLSNDRNTNDTSSVVSKQQHNNNKTLYEDLEGPSSSVAPLSDLECLWDAY 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151047g00032 428 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Stsc151047g00032 428 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Stsc151047g00032 428 FunFam NAC domain-containing protein 100-like 25 171 - -
Stsc151047g00032 428 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Stsc151047g00032 428 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 318 - -
Stsc151047g00032 428 MobiDBLite consensus disorder prediction 343 399 - -
Stsc151047g00032 428 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151047g00032 Stsc-Chr151047 202488 204758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151047g00032 1 293 NAC Transcription Factor Family AT5G18270 58.224 3.90e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc151047g00032 NAM 5.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151047g00032 - - gmx:100784372 489.189