Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151045g00030 ATGGAGCATATGAAACTCTTATTGATCTTAACAACTGTACTGCTCAACACACCAAGTCTGACTCTGAGCAGCGACAATGACAACGACGAAGTTCTTGTTCATGAGTACTACAAAGACAAGTGTCCCTTGGCTGAAGAGATAGTGAGACACAATGTTGAAGTAGCAGTGTTCAAAGATCCTCGTTTGGCAGCATCATTACTCCGACTACACTTTCATGATTGTTTTGTGATGGGGTGCGACGCGTCGGTGCTTTTGGACAGCGTTGAAGGGATGGCAAGTGAAAAGGAAGCAGGACCAAACAAGGATTCACTTCGCGGATTTGAGGTCATAGACAAAATCAAGTACTTGCTTGAAGAGGAATGCCCTTTAACAGTTTCTTGCGCTGATATCCTTGCAATCGCGGCTCGCGATGCAGTTCTACTGCGAGGAGGACCAAGATGGGAAGTGTTGCTTGGGAGGAAAGACTCTCTAGAATCAAGCTTCAGCGGCGCAAACTTGTTAATTCCAGCTCCTAATTCATCCTTAGAAGCTCTGATCAACAACTTTGCGCAGCAAGGTCTCGACATCAGAGACTTGGTAGCTCTATCAGGTAGCCACACCATTGGAAGAGCAAGATGTGTGAGCTTCAGGCAAAGAATCTATCAAGAGAAGCAAGAGTATCACTATGGCTATGACCGGTATAACCGTTACACAAGCTTCCGAAGGATCCTAGAGTCAGTGTGCCCTGTTACCGGAAGGGACAACAAATTTGCACCGTTAGATTATGAGACTCCAAAACGGTTTGACAACCACTACTTCATTAATATTCTCCAAGGGAATGGCTTGTTAGGGTCTGATAACGTGTTGATTAGTCAAGATTACGATGGGAAGATAACAGAGATGGTTTGGAATTATGCCTCCAATGAAGAACTTTTCTTCAAGTCTTTTGCTAAATCCATGATTAAGATGGGGAGTATTAATGTCCTAACTGGAGATGAAGGACAAATTAGGAAAAATTGTAGGTTCGTCAATGCTTAG 1017 0.4376 MEHMKLLLILTTVLLNTPSLTLSSDNDNDEVLVHEYYKDKCPLAEEIVRHNVEVAVFKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMASEKEAGPNKDSLRGFEVIDKIKYLLEEECPLTVSCADILAIAARDAVLLRGGPRWEVLLGRKDSLESSFSGANLLIPAPNSSLEALINNFAQQGLDIRDLVALSGSHTIGRARCVSFRQRIYQEKQEYHYGYDRYNRYTSFRRILESVCPVTGRDNKFAPLDYETPKRFDNHYFINILQGNGLLGSDNVLISQDYDGKITEMVWNYASNEELFFKSFAKSMIKMGSINVLTGDEGQIRKNCRFVNA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151045g00030 338 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 Pfam Peroxidase 49 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 CDD secretory_peroxidase 32 336 IPR033905 GO:0004601|GO:0042744
Stsc151045g00030 338 PANTHER PEROXIDASE 72-RELATED 31 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 FunFam Peroxidase 169 316 - -
Stsc151045g00030 338 ProSiteProfiles Plant heme peroxidase family profile. 31 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 Gene3D Peroxidase, domain 2 169 316 - -
Stsc151045g00030 338 SUPERFAMILY Heme-dependent peroxidases 33 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151045g00030 338 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Stsc151045g00030 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Stsc151045g00030 338 FunFam Peroxidase 35 174 - -
Stsc151045g00030 338 Gene3D - 36 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151045g00030 Stsc-Chr151045 196706 198067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151045g00030 91 337 Peroxidase AT2G35380 66.802 3.23e-124 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151045g00030 K00430 - gmx:100778051 555.058