Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151045g00022 ATGGGAAGAACCTCCTCACTCTGCAACCTCTTCTCTTGCTTCGCACCACCCTCCGCCAACGACCGCCACCACCAACAACCACCCGACCTCGCATTCCAAGAAACCGAACCGCTCGACGAAACCCTAGGTCACTCCTTCTGCTACGTCAGATCCTCAAATCGCTTCCTCTCTTCTCCCACTCACTCACCCTCTCATTCCGATCGCTTCCTCACTTCCCCTTCCGCCTCCCTTCGCTTCTCCCCAACCCACACCGAACCCGTTTTCAAGTCCATTTCCGGTGCCTCCGTCAGCGCCAACAGCTCCGCTCCCAAAACCGTTCTCCAATTTGACGCTGATGCGGCAGCTGGTTTCCCTCCCAGGGGCAGTATCGTAAATGGATTCGAAGCCACCTCGTCGTTTAGCGCGCTCCCGCTTCAACCAGCTCCTAGAGGCAATGGTGAGCCCTCTGGAAGGGCCTTCTTCCTCTCCGGTCCAATCGAGAGCGGAGCTATGTCTGGTCCACTTGACGCCGGCGCTGCCGCGGAAGGAGGAGGACCTGCCTCTGCCGCCGGTGTTCCTTTCTCGGCGCCGCTGGGCGGCTTGTACGGCAAGAAGAAGCGGAAGAAGGGGATCCCTGGGCTTAGGAAGGCGTTCCACCGGAGGAGCCTCTCGGAGATGAAACGGCCTTGGGTGGTGCCCGTGCTGAACTTCGTCGGGAGGAAGGAAGATCCGCCGGAGATTGAAGGAGGGAGTGGGGCTGCAGCGGCGGAGGCGGGGAAGGGCGAGAGCAATGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGCGTGCACGTGGTGGTATCGGAGGAGCAGGGTTGGTTGTTCGTGGGGATCTATGATGGCTTCAACGGTCCTGATGCGCCGGAGTTCTTGATGGGTCACCTGTACCGTGCTGTACACAGTGAGCTACAGGGGTTGTTTTGGGAAGTCGAAGAAGAAACAGCAGTGGAAACTAACCCCTTGAGTGAACCTGCATCTGCACATGCAGCTGAATCGTCAGTGGCAGTTGAAGAAGACTCCAAGGACGATGGAGGGTCAGCAAAGAGAGTGACATTTCAGGTGGAGGGAACGGAGAGCAGGCGGCGCAGGCTGTGGGAGCTTCTTGCGGAGGATGCTGCTGAAGATGGGCTTGATCTTTCGGGTTCGGACAGGTTTGCATTTTCGGTTGATGATGCACTCAGCGTGAGCAAGGAGGGCTCATCGGGTAGTAGAAGGTGGATGGTGTTATCAAAATTGAAGCATGGATTGTCCAAGCACAAGGAGGGCCGTGGGGGGAAGTTGTTACCTTGGAGCTTGGCCACCGAAGATAAGGAAAAGGTTGAGGTGGAAGCCCGGGCAGAAGAAAAATCTCATGGTGGTGAAGGCACTGGAACTGGCAATGGCAATGGTGGTGGTAGGAGACGGAAAGTGGGACCTGTGGATCATGATCTGGTTTTGAGGGCATTGTCTCGGGCACTTGAGATGACAGAACTTGCATATTTGGATATGACGGATAAGGTTATCGATACGAACCCAGAGCTTGCTCTGATGGGATCTTGTCTACTAGTTGCTTTGATGAGGGGCGAGGATGTGTATGTGATGAACGTGGGCGATAGCAGGGCCATTGTTGCTCAGTATGAGCACATAGAAGTTGGTTGCAGCAAGGGAACCGGAAGTAATGGGGATGTTGGGTCAGGTACAGAGAGCATTACAGTGGAGTCTTCATTAGGCCAAGGTGAACGTGCCGTCAGGTCAGGGAAGGAGGGTCCTGCTCAGGAAATGAGGTTGGTGGCATTGCAGTTGTCCACTGACCACAGCACGAGTGTTGAAGAGGAAATCATTAGGATCAAGAATGAACATCCTGATGATAGCCACTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTCACCAGAGCATTCGGGGCAGGATTTTTGAAACAGCCAAAATTCAATGATGCAGTACTAGAAATGTTTCGAAATGAATATATTGGAACTGCTCCATACGTATCGTGCTGCCCTTCATTACGTCATCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCCCAACATTTGATTGAGGAGCTGCTTGTCCGTGCAGCCAAAAAGGCTGGAATGGATTTTCATGAGTTGCTAGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAGTCATCAGGGAAGTACCTGTGA 2337 0.5289 MGRTSSLCNLFSCFAPPSANDRHHQQPPDLAFQETEPLDETLGHSFCYVRSSNRFLSSPTHSPSHSDRFLTSPSASLRFSPTHTEPVFKSISGASVSANSSAPKTVLQFDADAAAGFPPRGSIVNGFEATSSFSALPLQPAPRGNGEPSGRAFFLSGPIESGAMSGPLDAGAAAEGGGPASAAGVPFSAPLGGLYGKKKRKKGIPGLRKAFHRRSLSEMKRPWVVPVLNFVGRKEDPPEIEGGSGAAAAEAGKGESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWEVEEETAVETNPLSEPASAHAAESSVAVEEDSKDDGGSAKRVTFQVEGTESRRRRLWELLAEDAAEDGLDLSGSDRFAFSVDDALSVSKEGSSGSRRWMVLSKLKHGLSKHKEGRGGKLLPWSLATEDKEKVEVEARAEEKSHGGEGTGTGNGNGGGRRRKVGPVDHDLVLRALSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVALMRGEDVYVMNVGDSRAIVAQYEHIEVGCSKGTGSNGDVGSGTESITVESSLGQGERAVRSGKEGPAQEMRLVALQLSTDHSTSVEEEIIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKFNDAVLEMFRNEYIGTAPYVSCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLVRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151045g00022 778 SMART PP2C_4 251 764 IPR001932 -
Stsc151045g00022 778 MobiDBLite consensus disorder prediction 322 360 - -
Stsc151045g00022 778 ProSiteProfiles PPM-type phosphatase domain profile. 250 766 IPR001932 -
Stsc151045g00022 778 MobiDBLite consensus disorder prediction 341 360 - -
Stsc151045g00022 778 CDD PP2Cc 481 766 IPR001932 -
Stsc151045g00022 778 MobiDBLite consensus disorder prediction 451 477 - -
Stsc151045g00022 778 SUPERFAMILY PP2C-like 264 767 IPR036457 -
Stsc151045g00022 778 Pfam Protein phosphatase 2C 599 731 IPR001932 -
Stsc151045g00022 778 Pfam Protein phosphatase 2C 493 550 IPR001932 -
Stsc151045g00022 778 PANTHER PROTEIN PHOSPHATASE 2C 249 765 IPR015655 GO:0004722|GO:0006470
Stsc151045g00022 778 Gene3D - 245 773 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151045g00022 Stsc-Chr151045 137667 142441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151045g00022 5 778 PP2C-type Phosphatase Gene Family AT2G35350 57.177 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151045g00022 - - gmx:100775371 999.193