Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151045g00012 ATGGCTGGTTTGGATTTAGGAACAGCTTCACGCTTCGTTCAAAACCTCCACAGACCAGAATTCAACCTCCATCAGAACCACCACCACCAACACCATCATCATCATCAACATCAACATCATCACCAACAAGATTCCGAAGAAGACGCCAACAACAACCAAGATCACTATGAGGATGATGCTCCCCACAACCAGACAGGTTTGGACCTCGCATCGGGAGACGTCGTCGCTCGCCGCCCTAGGGGGAGGCCGCCGGGATCCAAGAACAAGCCCAAGCCGCCGGTCATCATAACCAGGGAGAGCGCCAACACGCTCAGAGCACACATCCTCGAGGTAGCAAGCGGCTGCGACGTCTTCGACAGCGTCGCAACCTACGCCCGCCGTCGCCAGCGCGGGATCTGCATCCTCAGTGGCAGCGGCACCGTCAATAACGTCACCATCAGGCAGCCAGCCGCCGCCGGAGCAGTAGTCACGCTCCACGGAAGGTTCGAGATATTGTCCCTCTCCGGATCGTTTCTTCCGCCGCCAGCTCCTCCCGGCGCCACCAGCCTAAGCATATACCTGGCAGGGGGGCAGGGGCAGGTGGTCGGAGGGAGTGTGGTTGGGGAGTTGATCGCGGCGGGGCCGGTGATTGTGATTGCTGCTTCTTTCACGAACGTGGCTTATGAGAGGTTGCCTTTGGATGAAGATGAACAGCTTCAGGGTGGCGGTGGCGGTCAGGGTTCCGGTGGCGGTGGTAATAGTCCTTTTGGAGACCCGTCTTCAGGGCTTCCTTTCTTCAATTTGCCGGTGAATATGGCGAATGTTCAGTTGCCATCAGCAGTAGATGGGTTTTCATCACGTCCACCACCACCATTTTAA 858 0.5711 MAGLDLGTASRFVQNLHRPEFNLHQNHHHQHHHHHQHQHHHQQDSEEDANNNQDHYEDDAPHNQTGLDLASGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGCDVFDSVATYARRRQRGICILSGSGTVNNVTIRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELIAAGPVIVIAASFTNVAYERLPLDEDEQLQGGGGGQGSGGGGNSPFGDPSSGLPFFNLPVNMANVQLPSAVDGFSSRPPPPF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151045g00012 285 CDD DUF296 105 188 IPR005175 -
Stsc151045g00012 285 MobiDBLite consensus disorder prediction 229 256 - -
Stsc151045g00012 285 MobiDBLite consensus disorder prediction 40 62 - -
Stsc151045g00012 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 230 - -
Stsc151045g00012 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 239 IPR014476 GO:0003680
Stsc151045g00012 285 FunFam AT-hook motif nuclear-localized protein 104 231 - -
Stsc151045g00012 285 Gene3D - 104 233 - -
Stsc151045g00012 285 ProSiteProfiles PPC domain profile profile. 101 238 IPR005175 -
Stsc151045g00012 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 218 IPR005175 -
Stsc151045g00012 285 MobiDBLite consensus disorder prediction 26 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151045g00012 Stsc-Chr151045 87965 89595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151045g00012 1 277 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.902 1.38e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151045g00012 - - qsa:O6P43_024484 355.14