Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151045g00003 | ATGATATCCACCGATGAATCATGGACTACTTGGCTCTGTGATTTGGAAGAGGATGACTACGCTTTTATGAATAGGCTTGCTAATGACAATGCCATAACAGTAGCCCCTAATAATAACTCCAACTCAAACTCCCAAACATCCTTCTCCACAGATAGTAACAATGATGATGAGAGGCCATTAAAGGCTCTCAAGACCATCACCACCCCGCCAACCCCAACTAACAAGGATTCCTCATACCTTTTCTCCTTCAACAACAATAATCCATCAATGTCTACTGATTCTCATGCTACAAACAAGAAGCAGCCAAGACGCAGTAGTAATCAAAGAAGAACTGCCTCAGCTGGCAGATCCCCCCAACACGCTCACGATCACATCATTGCCGAAAGAATGAGAAGGGAAAAGATCAGCCAACAGTTCATAGCTCTTTCTGCTCTTATTCCAGGTCTCAAAAAGATGGACAAGGCTACGGTGTTAGGGGACGCTATCAAGTACGTGAAGCAGCTGCAAGATCAAGTGAAGATTCTAGAAAACGAAAGGAAAAGGAAAAACGCGGAGTGTGCTGTTTATGTTGTTGAGAAATCAGAGGTGTGTGGAGAGGAAGATGTGTCATCAGACACTTCCTCCAATAATTCTTCAGGTGGAGTAGGGGATGGAAACTCGGTTAGTAGGTCGGTGCTGCCTGAAGTGGAGGCAAGGGTGTCTCAGAAGAACGTCCTCATTCGGATCCACACCGAGCAACACAAGGGACTCCTAATGCACATTCTCACACTCATTGAGAAACTCCATCTCTCTGTTCTCAACACCACTTCCTTGCCATTTGGAACCTCAATCGTCGACATAACCATCACAGCCGAGATGGATGATAAGTTCAGCTTAGGCGTAAAGGAGCTTGCTAGAAACATAAGGGTGGGGCTGTTGCAATTGATGTAG | 930 | 0.4538 | MISTDESWTTWLCDLEEDDYAFMNRLANDNAITVAPNNNSNSNSQTSFSTDSNNDDERPLKALKTITTPPTPTNKDSSYLFSFNNNNPSMSTDSHATNKKQPRRSSNQRRTASAGRSPQHAHDHIIAERMRREKISQQFIALSALIPGLKKMDKATVLGDAIKYVKQLQDQVKILENERKRKNAECAVYVVEKSEVCGEEDVSSDTSSNNSSGGVGDGNSVSRSVLPEVEARVSQKNVLIRIHTEQHKGLLMHILTLIEKLHLSVLNTTSLPFGTSIVDITITAEMDDKFSLGVKELARNIRVGLLQLM | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151045g00003 | 309 | MobiDBLite | consensus disorder prediction | 199 | 221 | - | - | |
Stsc151045g00003 | 309 | PANTHER | BHLH TRANSCRIPTION FACTOR | 39 | 307 | - | - | |
Stsc151045g00003 | 309 | MobiDBLite | consensus disorder prediction | 201 | 219 | - | - | |
Stsc151045g00003 | 309 | SMART | finulus | 125 | 174 | IPR011598 | GO:0046983 | |
Stsc151045g00003 | 309 | Pfam | Helix-loop-helix DNA-binding domain | 124 | 169 | IPR011598 | GO:0046983 | |
Stsc151045g00003 | 309 | Coils | Coil | 158 | 185 | - | - | |
Stsc151045g00003 | 309 | MobiDBLite | consensus disorder prediction | 32 | 122 | - | - | |
Stsc151045g00003 | 309 | MobiDBLite | consensus disorder prediction | 32 | 53 | - | - | |
Stsc151045g00003 | 309 | MobiDBLite | consensus disorder prediction | 66 | 96 | - | - | |
Stsc151045g00003 | 309 | Gene3D | - | 118 | 188 | IPR036638 | GO:0046983 | |
Stsc151045g00003 | 309 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 119 | 168 | IPR011598 | GO:0046983 | |
Stsc151045g00003 | 309 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 123 | 189 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151045g00003 | Stsc-Chr151045 | 19163 | 20818 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151045g00003 | 1 | 305 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G22770 | 35.224 | 8.96e-49 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Stsc151045g00003 | HLH | 2e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151045g00003 | - | - | ahf:112748090 | 343.199 |