Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00058 ATGAGTAGACTCCAGAAGATGAAAAGTTCCTATGATGATTCATTACTGAAAATTGATAGAATCTCAGACATTCTTGGGATTGATGAAGTAACTAGCCTTGATGGTGAACATAACCGTGAGACTTGGCATGTTCAGGTCTTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCCAAGGAACCTAATGATGCTATAAGAAGGAACTTGGTGTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAGGCAATCAGATCTGCCCAAAATTTCATATATATTGAGAACCAATACTTTCTTGGATCATCATATAATTGGGATTCTCACAAAGACCTTGGTGCAAACAACTTAATTCCAATGGAACTTGCACTAAAGATAGCCAACAAAATCAAACACCATGAGAGATTTAGTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTACACCCACAGGTAAACCTACTCAGCGGATTCTGTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACGATTTACAAGGCCTTGCAAGAGGCTGGGCTTGACAATGAGTATGAACCACAAGACTATTTGAATTTCTTTTGCCTTGGCAATCGTGAGATCCCTGAAAATGAAGATATTGCAAATCCTAGCGGTGAAAACACTCCTCAGGCACTGGCCAAAAAGAACAGGAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAGTATGTGTTGCTGGGTTCTGCAAACATAAACCAGCGATCAATGGAAGGCACCAGAGACACAGAGATAGCAATGGGGGCATATCAACCTCATCATACCTGTGCAACCAACCGGTCTAAACCCCGCGGGCAGGTGCATGGCTACAGAATGTCACTGTGGAAGGAGCATACTGGAGGATTTGAAGCGTGTTTCGAGCATCCGGAGAGTCTCGAATGCGTGAGGCGTGTAAGGTCATTGAGTGAGCATAACTGGAGACAGTTTGCAGCTGATGAAGTAACCGAAATGAAGAGCCATCTGTTGAAGTACCCTGTTCATGTTGATTCAAAGGGCAATGTGAGATCCCTTCCTGGCTGCGAAACATTCCCTGATCTTGGTGGCAACATAACTGGCAACTTCACACTACTGCAAGAAAATCTCACCATCTGA 1161 0.4212 MSRLQKMKSSYDDSLLKIDRISDILGIDEVTSLDGEHNRETWHVQVFRSIDSNSVKGFPKEPNDAIRRNLVCGKNVMIDMSIHSAYVKAIRSAQNFIYIENQYFLGSSYNWDSHKDLGANNLIPMELALKIANKIKHHERFSVYIVIPMWPEGTPTGKPTQRILFWQFKTMQMMYETIYKALQEAGLDNEYEPQDYLNFFCLGNREIPENEDIANPSGENTPQALAKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPHHTCATNRSKPRGQVHGYRMSLWKEHTGGFEACFEHPESLECVRRVRSLSEHNWRQFAADEVTEMKSHLLKYPVHVDSKGNVRSLPGCETFPDLGGNITGNFTLLQENLTI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00058 386 SUPERFAMILY Phospholipase D/nuclease 70 317 - -
Stsc151044g00058 386 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 232 259 IPR001736 GO:0003824
Stsc151044g00058 386 SMART pld_4 232 259 IPR001736 GO:0003824
Stsc151044g00058 386 Pfam Phospholipase D Active site motif 233 259 IPR001736 GO:0003824
Stsc151044g00058 386 Gene3D Endonuclease Chain A 41 282 - -
Stsc151044g00058 386 PANTHER PHOSPHOLIPASE D 6 375 IPR015679 -
Stsc151044g00058 386 FunFam Phospholipase D 49 278 - -
Stsc151044g00058 386 Pfam Phospholipase D C terminal 307 376 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00058 Stsc-Chr151044 302621 305211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00058 2 386 Phospholipase D Gene Family (Wang group) AT2G42010 66.102 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00058 K01115 - gmx:100786241 670.233