Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00043 ATGAGAAAACACCGCCAAATTCACCTCTCTCATGCTTTCTTATGCGCCATTCTCTGCTTGGTTTCTTGTGTAACGGTATCACCAGCCACTGAGAGAGAGATTCTGCAACAATTCAAGGGCAACATCACAGAGGACCCTTTCAACAGCTTGAGTTCTTGGGTTCCCAGTGGAAACCCCTGCCAAGATTACAGAGGTGTTTACTGCAACGATGAAGGTTTTGTGGAAAGGATCGTTCTTTGGAACACTAGCTTGGCTGGGGTGTTGTCTCCAGCATTGTCTGGTTTGAAGAGATTGAGGGCATTGACATTGTTTGGGAACCGCTTCAAGGGTAACATCCCAGATGATTATGCTGATCTTCACACACTGTGGAAGATCAATTTGAGCTCCAATGCATTATCTGGTTCAATCCCAGAGTTCATTGGTGATTTGCCTAACATTCGGTTTCTAGATTTGTCCAACAATGGCTTCACTGGGGAGATACCTCCGGCCTTGTTCAGGTACTGTTACAAAACCAGGTTTGTGTCTCTTTCTCATAACAACCTTGCTGGTTCAATTCCTGTGTCATTGGTGAATTGCGCCAACCTTGAAGGATTTGATCTTTCCTATAACAATCTGACCGGCAGTGTCCCTTCGCGGCTTTGTGATATTCCAAGCTTGTCATATCTGTCACTGAGAAGCAATGCCTTATCAGGGAGTGTGCAAGGTCTCATATCACCTTGCCGGAGTTTGAAACATTTGGATTTCGGTAGTAATATGTTCAGGGATTTGGCTCCATTCAGCATCCTTGAATTGCAAAATCTTACTTATTTCAATGTATCCTATAATAGCATAGTTAGATGCAAGAACCTAAAGGTCTTGGCCTTGGGATTGAATAGGCTAAAAGGGAGTATCCCAGTTGATATTCAGGAATTGCAAAAGCTACTAGTTATCAAATTGGGTAATAACTCAATAACTGGAATGATTCCCAATGGTTTTGGCAACATTGAGCTGCTTGAAGTTCTAGATTTGCACAATTTAAACCTCATTGGTGAAATTCCAGCTGATATAAGCAATTGCAGATTTCTTCTTCAGTTGGACCTCTCTGGTAATGGCTTAGAGGGTGAGATTCCTCAGACGCTATACAACATGACATACTTGGAATCCCTTGACTTACATCAAAACCAGCTCAATGGAAGCATCCCACCGAGCCTAGGAAACCTGTCAAGGTTGCAATACCTAGATCTGTCACATAATTCACTTTCTGGTTTAATCCCATCTTCTCTTGGAAATTTAGGAAACATGACTCATTTTGATCTTTCATTCAACAATCTATCCGGTCTCATTCCTCAAATTGAAACCATACAGCATTTTGGTCCGTCTGCTTTTTCCAATAATCCTTTTCTCTGTGGTGCTCCTTTGGACTCCTCTTGCTCGGCGAAAGGAACTACTTCACCTTCAGCACCTGGGAAGACTAAAGTTCTAAGCATATCGGCAATTGTTGCAATTGTTGCTGCAGCTGTGATTCTAACAGGGGTTTGCTTGGTGACCATCATGAATATCAGGGCTCGTCGTCGAAAAAAAGACAGCGATGAGATCATGGTTGTCGAGAGCACACCCCTTGGATCATCAACAGAATCAAATGTTATAATTGGAAAGCTGGTTCTGTTCAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACCAGAGCATTGCTTGATAAAGAGTCTATAATAGGTGGTGGATCAATCGGAACAGTTTACAGAACTGATTTCGAAGGTGGCATCTCTATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCCGAAACCAGGAAGAATTCGAGCAGGAGATTGGACGATTAGGCAACCTCCAACACCCAAATTTAGTTTCTTTACAAGGTTACTATTGGTCCTCTTCAATGCAATTGATTCTATCAGAGTTTGTCCGTAATGGGAATCTCTATGATAATCTACATGGGGTTGGATATCCTGGAACAAGCACTAGCAGCAGCAACAGGGAGTTATATTGGTCTAGAAGGTTCCAAATCGCACTTGGAACCGCAAGAGCACTTGCCTATCTTCACCACGACTGCAGACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATACTCTTAGATCACAAGTATGAGGCTAAGTTGTCGGATTATGGTTTAGGAAAGTTGCTCCCCATTTTGGACAATTACGGTCTGACCAAGTTCCACAATGCGGTCGGGTATGTCGCACCAGAGTTGGCTCAAAGCCTAAGGCAGAGTGAGAAGTGTGATGTGTACAGTTTTGGGGTCATTCTTTTGGAGCTGGTTACAGGTAGGAAGCCAGTAGAAAGTTCAACATCAAGTGAGGTGGTGATCTTGTGTGAATATGTAAGAAGTTTGTTAGAGGTTGGCTCAGTTTCAAACTGCTTTGACAGAAACTTGTTGGGATTTGCTGAGAACGAGTTAATTCAGGTTATGAAGTTGGGACTAATTTGTACCTCGGAGGATCCATTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTTCTTGAGTCCATTAGAAATGGATTGGGAGCACACTAA 2571 0.4282 MRKHRQIHLSHAFLCAILCLVSCVTVSPATEREILQQFKGNITEDPFNSLSSWVPSGNPCQDYRGVYCNDEGFVERIVLWNTSLAGVLSPALSGLKRLRALTLFGNRFKGNIPDDYADLHTLWKINLSSNALSGSIPEFIGDLPNIRFLDLSNNGFTGEIPPALFRYCYKTRFVSLSHNNLAGSIPVSLVNCANLEGFDLSYNNLTGSVPSRLCDIPSLSYLSLRSNALSGSVQGLISPCRSLKHLDFGSNMFRDLAPFSILELQNLTYFNVSYNSIVRCKNLKVLALGLNRLKGSIPVDIQELQKLLVIKLGNNSITGMIPNGFGNIELLEVLDLHNLNLIGEIPADISNCRFLLQLDLSGNGLEGEIPQTLYNMTYLESLDLHQNQLNGSIPPSLGNLSRLQYLDLSHNSLSGLIPSSLGNLGNMTHFDLSFNNLSGLIPQIETIQHFGPSAFSNNPFLCGAPLDSSCSAKGTTSPSAPGKTKVLSISAIVAIVAAAVILTGVCLVTIMNIRARRRKKDSDEIMVVESTPLGSSTESNVIIGKLVLFSKSLPSKYEDWEAGTRALLDKESIIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEQEIGRLGNLQHPNLVSLQGYYWSSSMQLILSEFVRNGNLYDNLHGVGYPGTSTSSSNRELYWSRRFQIALGTARALAYLHHDCRPPILHLNIKSSNILLDHKYEAKLSDYGLGKLLPILDNYGLTKFHNAVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESSTSSEVVILCEYVRSLLEVGSVSNCFDRNLLGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLESIRNGLGAH 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00043 856 Gene3D Phosphorylase Kinase; domain 1 536 644 - -
Stsc151044g00043 856 PANTHER OS05G0588300 PROTEIN 211 324 - -
Stsc151044g00043 856 Gene3D Transferase(Phosphotransferase) domain 1 645 853 - -
Stsc151044g00043 856 Pfam Protein kinase domain 570 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151044g00043 856 PRINTS Leucine-rich repeat signature 379 392 - -
Stsc151044g00043 856 PRINTS Leucine-rich repeat signature 400 413 - -
Stsc151044g00043 856 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Stsc151044g00043 856 Gene3D Ribonuclease Inhibitor 239 477 IPR032675 -
Stsc151044g00043 856 ProSiteProfiles Protein kinase domain profile. 568 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151044g00043 856 SUPERFAMILY L domain-like 238 466 - -
Stsc151044g00043 856 SMART LRR_typ_2 216 239 IPR003591 -
Stsc151044g00043 856 SMART LRR_typ_2 424 447 IPR003591 -
Stsc151044g00043 856 SMART LRR_typ_2 304 327 IPR003591 -
Stsc151044g00043 856 SMART LRR_typ_2 143 167 IPR003591 -
Stsc151044g00043 856 SMART LRR_typ_2 400 423 IPR003591 -
Stsc151044g00043 856 SMART LRR_typ_2 328 352 IPR003591 -
Stsc151044g00043 856 SMART LRR_typ_2 376 399 IPR003591 -
Stsc151044g00043 856 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 645 855 - -
Stsc151044g00043 856 Pfam Leucine rich repeat 174 229 IPR001611 GO:0005515
Stsc151044g00043 856 Pfam Leucine rich repeat 357 413 IPR001611 GO:0005515
Stsc151044g00043 856 FunFam Putative LRR receptor-like serine/threonine-protein kinase 545 644 - -
Stsc151044g00043 856 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 28 166 - -
Stsc151044g00043 856 FunFam Leucine-rich repeat receptor protein kinase EMS1 167 260 - -
Stsc151044g00043 856 CDD STKc_IRAK 574 849 - -
Stsc151044g00043 856 Gene3D Ribonuclease Inhibitor 28 169 IPR032675 -
Stsc151044g00043 856 SUPERFAMILY L domain-like 30 278 - -
Stsc151044g00043 856 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 276 474 - -
Stsc151044g00043 856 Gene3D Ribonuclease Inhibitor 170 238 IPR032675 -
Stsc151044g00043 856 SUPERFAMILY Protein kinase-like (PK-like) 569 847 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00043 Stsc-Chr151044 230943 233873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00043 30 853 Receptor kinase-like Gene Family AT1G62950 64.401 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Stsc151044g00043 Pkinase 2.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00043 - - mtr:11437247 1405.19