Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00036 ATGGATCCAATTACAGCACACGGACATTCGCTTCCACCTCCATTCCACACAGCAAGAGATCTCTTGCACCACCACCAGCAACAGCAACAGCAGCAGCAGTTTCACTCCTTACAGCAGCAGCAGCAACCCACAGAAGACGAGCAAAGCGGAAGCAGCGGAGGACTCAACCTCGCTCACAAGAGGGAAAGAGAAGATAACAACAACAGCGACAGCAAAGATGGCACACCGGGTGGAGGAGGAGGAGGAGGATCCGGTGAAACAGAAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAGAACAAACCGAAGCCACCGATCATCATCACCCGGGACAGCGCCAATGCCCTAAAGACACATGTTATGGAAGTTGCAGACGGTTGTGACATCGTCGAGAGCGTCTCCAACTTCGCAAGGAGGCGCCAAAGAGGGGTCTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACTCTCAGACAACCAGCCTCCTCTGGAGCCGTTGTCTCCCTCCATGGAAGGTTCGAGATCTTGTCCTTAGCAGGATCCTTCCTCCCTCCTCCAGCTCCCCCCGCAGCCTCCGGCTTGACCATATATCTAGCCGGAGGCCAAGGGCAGGTGGTCGGAGGGAGCGTGGTGGGGACACTGATTGCTTCGGGGCCGGTGGTGATCATGTCCGCTTCCTTCAGCAACGCTGCGTATGAAAGGCTTCCTTTGGAGGAAGAAGACCCTTCCATGCCCTTGCAAGGTACTGGCGGTGGCGGAGGCGGAGGCGGCGGGTCAATCGGGTCCCCCGGAAGTGGGCAGCAGCAGATGTTAGGGGACGCAACTGCTCCACTGTTCCATGGTTTGAATCCGAATCTTCTGAATTCAGTTCAGATGCCAACGGAGGCTTTCTGGAATACTGGTCGCTCACCTTATTGA 927 0.562 MDPITAHGHSLPPPFHTARDLLHHHQQQQQQQQFHSLQQQQQPTEDEQSGSSGGLNLAHKREREDNNNSDSKDGTPGGGGGGGSGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMSASFSNAAYERLPLEEEDPSMPLQGTGGGGGGGGGSIGSPGSGQQQMLGDATAPLFHGLNPNLLNSVQMPTEAFWNTGRSPY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00036 308 CDD DUF296 119 186 IPR005175 -
Stsc151044g00036 308 ProSiteProfiles PPC domain profile profile. 115 252 IPR005175 -
Stsc151044g00036 308 Gene3D - 118 246 - -
Stsc151044g00036 308 FunFam AT-hook motif nuclear-localized protein 118 245 - -
Stsc151044g00036 308 PIRSF ESCAROLA 19 307 IPR014476 GO:0003680
Stsc151044g00036 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 244 - -
Stsc151044g00036 308 MobiDBLite consensus disorder prediction 24 55 - -
Stsc151044g00036 308 MobiDBLite consensus disorder prediction 1 109 - -
Stsc151044g00036 308 MobiDBLite consensus disorder prediction 243 274 - -
Stsc151044g00036 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 302 IPR014476 GO:0003680
Stsc151044g00036 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 232 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00036 Stsc-Chr151044 207568 209391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00036 1 308 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 58.333 3.94e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00036 - - gmx:100781436 439.499