Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00024 ATGGATGCTGGGCTCCCCAAGCTTCTTGCAGATGACGTTGTTTTCTCAGCTCTGAAAGTGAGTGCTGCTATGGGGTACTTGGCCCCTGAATATGTTACTACAGGACGCTTCACTGAGAAGAGTGACATCTACGCATTTGGTGTCATTGTTCTTCAAGTTCTGTCTGGGAGGAAAACTATAGGTGGTTCGATACGGCTGGCAGTTGAATCTCTAAGATTTGATGATTTTGTTGACAGAAATCTGAGGGGAAGATATTCCAAACTTGAGGCAACAGTGCTTTCAAAGCTTGCAACACTCTGCACCCATGAGCTTCCTGACCAAAGGCCAACTATGGTGGATGTGATTCAAGAGCTGAGTGTGTTTCCTTCTCATTCATGA 378 0.455 MDAGLPKLLADDVVFSALKVSAAMGYLAPEYVTTGRFTEKSDIYAFGVIVLQVLSGRKTIGGSIRLAVESLRFDDFVDRNLRGRYSKLEATVLSKLATLCTHELPDQRPTMVDVIQELSVFPSHS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00024 125 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 119 - -
Stsc151044g00024 125 Pfam Protein tyrosine and serine/threonine kinase 2 118 IPR001245 GO:0004672|GO:0006468
Stsc151044g00024 125 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151044g00024 125 SUPERFAMILY Protein kinase-like (PK-like) 2 119 IPR011009 -
Stsc151044g00024 125 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00024 Stsc-Chr151044 135355 136166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00024 2 118 Receptor kinase-like Gene Family AT2G35620 39.844 1.16e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Stsc151044g00024 PK_Tyr_Ser-Thr 4.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00024 - - aip:107643018 233.802