Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00018 ATGGCTGCAAGACATGAGATTATTTTTGTACTGCCTCTCTTGCTGGTAAGCTTTGTAAGCCACACGGGTGGGACAACCACCCCACAAGACTTCATAAAATCGTCATGCAGGGCAACACGGTACCCTGCTCTCTGCGTGGAATGCCTCATTGGCTACGCAGGGGTCATTGGCCAAAGCAAGCGGCAGCTAGCCCTGGCGGCCTTATCAGTGACCATATCAAGCACACGGTCGTGTTCATCGTTCGTGAAGTCGATGGCGAAGCAGATGAGGATGAAGCCACGGGAGTACGGAGCGGTACAGGACTGCATAGAAAACATGGGGGACAGCGTGGACAGGCTGAGCCAATCGGTGAGGGAGATGGGGCGCGTGGGTGAAGGACTGGGAGAGGACTTTGAGTGGCACATGAGCAACGTGCAGACATGGGTCAGTGCTGCTCTCACTGACGACAACACGTGTCTTGATGGCTTTGATGGCCGTGCCATGAATGGCAATGTCAAGGCAGCCATTAAAGGCAGGGTCCTCCATGTTGCTCAGCTCACAAGTAACGCCCTCGCTTTGGTTAATCGCTTTGCTCAAACACACACTACTCCTCTTCAAACTCCTCCAATCTTAAACTAG 618 0.5324 MAARHEIIFVLPLLLVSFVSHTGGTTTPQDFIKSSCRATRYPALCVECLIGYAGVIGQSKRQLALAALSVTISSTRSCSSFVKSMAKQMRMKPREYGAVQDCIENMGDSVDRLSQSVREMGRVGEGLGEDFEWHMSNVQTWVSAALTDDNTCLDGFDGRAMNGNVKAAIKGRVLHVAQLTSNALALVNRFAQTHTTPLQTPPILN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00018 205 Pfam Plant invertase/pectin methylesterase inhibitor 30 186 IPR006501 GO:0004857
Stsc151044g00018 205 SMART PMEI_2 27 186 IPR006501 GO:0004857
Stsc151044g00018 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 186 - -
Stsc151044g00018 205 NCBIfam pectinesterase inhibitor domain 5 188 IPR006501 GO:0004857
Stsc151044g00018 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 191 IPR035513 -
Stsc151044g00018 205 FunFam Pectin methylesterase inhibitor 1 27 190 - -
Stsc151044g00018 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 190 IPR035513 -
Stsc151044g00018 205 CDD PMEI-like_3 34 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00018 Stsc-Chr151044 112176 112793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00018 32 193 Carbohydrate Esterase AT3G14310 30.061 7.44e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00018 - - psat:127120659 257.684