Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00011 ATGGGGCCAATGGACTTGAATTCGAGCCATGTTTCTCCCGTTCTTACGGATTCTGTGCCTGTAAACAAATCAAGATTAGGAATCCATTCTAGTCTGCTACCGTATAATTCCCAGCAAGATTCATCTTCACCTCTCTCCCCGGCAGCAGGGAAGCTATCAAGAACGGGTTCAAGAAAGAGTGCTGCAGGCAACATTGATGATGTTCGCTTCAATGGTTGGTTGGACGCCATGAAGGCATCTTCCCCTCCCAGGAAGAAGATTCTTAAGGGCTCCGTTATTAACACTCTGCTTCCTTCCAATATTGAATATGACAACGAAGACTACCCTTCATTGACCGATGATTATCCTTCAGCAATAGGGTGTTTTGGGAAAATCATTGGGCGTGCTAAGAATAAAAATGTTGCAGTGTTTCTAGATTACGATGGCACTCTTTCTCCAATAGTAGATGACCCTGACTGTGCCTTTATGTCAGACCCTATGCGTGAGACTGTTGAGAGCGTGGGAAGGTGTTTTCCAACAGCAATAATAAGTGGAAGAAGCCGTGACAATGTGTATGATTTGGTTAAACTAACAGAACTGTACTATGCGGGTAGTCATGGAATGGACATAATTGGGCCTCTTCGCCATAATAATGTGTCCAGTAACCTTCCAAATTGTGTCAATTCTACTGACCATCAGGGAAATCAGATAACTCTCTTTCAACCTGCTACACAGTTCCTCCCTATCATTGACGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGACATAAGGGGCGCAAAAGTTGAAAACCACAAGTTTTGTGTTTCTGTACATTACCGTAACGTAGAAGAGAATAATTGGACAACTATTGGACAACGTGTCCATGATGTGTTGAAAAATTACCCTGGTTTGCGTTCAACTCATGGACGGAAGGTTTTAGAGATTCGTCCAGTGATTGACTGGGACAAAGGGAAAGCAGTTCAATTCTTACTTGAATCTCTTGATCTAAACGATAAGGATGACGTGTTTCCTATCTATATTGGAGATGATAAAACCGATGAGGATGCTTTCAAGATTCTGCGAGAAACCAATCGGGGATGTGGGATTTTGGTGTCTTCGGTGATGAAAGAAAGCAGTGCTTCGTACTCTGTAAGAGACCCCAATGAGGTGATGGAGTTTCTTCAACTCCTCCTTAACTGGAAGCACGAGAGAGAAAGCAAGCATTACAACAGGCAAATTAAAGTCAAAGTATAG 1236 0.4264 MGPMDLNSSHVSPVLTDSVPVNKSRLGIHSSLLPYNSQQDSSSPLSPAAGKLSRTGSRKSAAGNIDDVRFNGWLDAMKASSPPRKKILKGSVINTLLPSNIEYDNEDYPSLTDDYPSAIGCFGKIIGRAKNKNVAVFLDYDGTLSPIVDDPDCAFMSDPMRETVESVGRCFPTAIISGRSRDNVYDLVKLTELYYAGSHGMDIIGPLRHNNVSSNLPNCVNSTDHQGNQITLFQPATQFLPIIDEVFRTLVEITKDIRGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDVLKNYPGLRSTHGRKVLEIRPVIDWDKGKAVQFLLESLDLNDKDDVFPIYIGDDKTDEDAFKILRETNRGCGILVSSVMKESSASYSVRDPNEVMEFLQLLLNWKHERESKHYNRQIKVKV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00011 411 Pfam Trehalose-phosphatase 137 381 IPR003337 GO:0003824|GO:0005992
Stsc151044g00011 411 CDD HAD_TPP 135 386 - -
Stsc151044g00011 411 NCBIfam HAD-IIB family hydrolase 136 355 IPR006379 -
Stsc151044g00011 411 FunFam Trehalose 6-phosphate phosphatase 242 401 - -
Stsc151044g00011 411 SUPERFAMILY HAD-like 135 394 IPR036412 -
Stsc151044g00011 411 MobiDBLite consensus disorder prediction 33 60 - -
Stsc151044g00011 411 NCBIfam trehalose-phosphatase 132 392 IPR003337 GO:0003824|GO:0005992
Stsc151044g00011 411 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 54 403 IPR044651 GO:0004805|GO:0005992
Stsc151044g00011 411 MobiDBLite consensus disorder prediction 33 50 - -
Stsc151044g00011 411 Gene3D - 134 218 IPR023214 -
Stsc151044g00011 411 Gene3D - 242 407 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00011 Stsc-Chr151044 59733 62021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00011 130 391 Trehalose Biosynthesis Gene Families AT1G70290 24.643 3.84e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00011 K01087 - qsa:O6P43_024315 518.079