Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00010 ATGGGGCCAATGGACTTGAATTCGAGCCATGTTTCTCCCGTTCTTACGGATTCTGTGCCTGTAAACAAATCAAGATTAGGAATCCATTCTAGTCTGCTACCGTATAATTCCCAGCAAGATTCATCTTCACCTCTCTCCCCGGCAGCAGGGAAGCTATCAAGAACGGGTTCAAGAAAGAGTGCTGCAGGCAACATTGATGATGTTCGCTTCAATGGTTGGTTGGACGCCATGAAGGCATCTTCCCCTCCCAGGAAGAAGATTCTTAAGGGCTCCGTTATTAACACTCTGCTTCCTTCCAATATTGAATATGACAACGAAGACTACCCTTCATTGACCGATGATTATCCTTCAGCAATAGGGTGTTTTGGGAAAATCATTGGGCGTGCTAAGAATAAAAATGTTGCAGTGTTTCTAGATTACGATGGCACTCTTTCTCCAATAGTAGATGACCCTGACTGTGCCTTTATGTCAGACCCTATGCGTGAGACTGTTGAGAGCGTGGGAAGGTGTTTTCCAACAGCAATAATAAGTGGAAGAAGCCGTGACAATGTGTATGATTTGGTTAAACTAACAGAACTGTACTATGCGGGTAGTCATGGAATGGACATAATTGGGCCTCTTCGCCATAATAATGTGTCCAGTAACCTTCCAAATTGTGTCAATTCTACTGACCATCAGGGAAATCAGATAACTCTCTTTCAACCTGCTACACAGTTCCTCCCTATCATTGACGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGACATAAGGGGCGCAAAAGTTGAAAACCACAAGTTTTGTGTTTCTGTACATTACCGTAACGTAGAAGAGAATAATTGGACAACTATTGGACAACGTGTCCATGATGTGTTGAAAAATTACCCTGGTTTGCGTTCAACTCATGGACGGAAGGTTTTAGAGATTCGTCCAGTGATTGACTGGGACAAAGGGAAAGCAGTTCAATTCTTACTTGAATCTCTTGATCTAAACGATAAGGATGACGTGTTTCCTATCTATATTGGAGATGATAAAACCGATGAGGATGCTTTCAAGTGGTTGTATATAAATGTAGATTCTGCGAGAAACCAATCGGGGATGTGGGATTTTGGTGTCTTCGGTGATGAAAGAAAGCAGTGCTTCGTACTCTGTAAGAGACCCCAATGA 1167 0.425 MGPMDLNSSHVSPVLTDSVPVNKSRLGIHSSLLPYNSQQDSSSPLSPAAGKLSRTGSRKSAAGNIDDVRFNGWLDAMKASSPPRKKILKGSVINTLLPSNIEYDNEDYPSLTDDYPSAIGCFGKIIGRAKNKNVAVFLDYDGTLSPIVDDPDCAFMSDPMRETVESVGRCFPTAIISGRSRDNVYDLVKLTELYYAGSHGMDIIGPLRHNNVSSNLPNCVNSTDHQGNQITLFQPATQFLPIIDEVFRTLVEITKDIRGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDVLKNYPGLRSTHGRKVLEIRPVIDWDKGKAVQFLLESLDLNDKDDVFPIYIGDDKTDEDAFKWLYINVDSARNQSGMWDFGVFGDERKQCFVLCKRPQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00010 388 NCBIfam HAD-IIB family hydrolase 136 354 IPR006379 -
Stsc151044g00010 388 Gene3D - 222 312 - -
Stsc151044g00010 388 Pfam Trehalose-phosphatase 137 355 IPR003337 GO:0003824|GO:0005992
Stsc151044g00010 388 NCBIfam trehalose-phosphatase 132 367 IPR003337 GO:0003824|GO:0005992
Stsc151044g00010 388 SUPERFAMILY HAD-like 135 355 IPR036412 -
Stsc151044g00010 388 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 54 354 IPR044651 GO:0004805|GO:0005992
Stsc151044g00010 388 MobiDBLite consensus disorder prediction 33 60 - -
Stsc151044g00010 388 FunFam Trehalose 6-phosphate phosphatase 236 312 - -
Stsc151044g00010 388 Gene3D - 136 353 IPR023214 -
Stsc151044g00010 388 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00010 Stsc-Chr151044 59733 62021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00010 130 352 Trehalose Biosynthesis Gene Families AT1G70290 24.786 9.50e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00010 K01087 - qsa:O6P43_024315 455.292