Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151044g00005 ATGTCGGCTTACAGAGACGAGGACGAGGACCCTCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCACACTTTCCCAAATCCGGAATAATGTTCCAAGACATCACTACTCTTCTACTTGATCCCAAAGCCTTCAAGGATACCATCGATTTGTTCGTCGAGCGTTACAAAGGGAAAAACATTAATGTTGTTGCAGGAATTGAAGCTCGGGGTTTCATATTCGGTCCTCCCATAGCATTAGCAATAGGAGCAAAGTTTGTACCACTGAGGAAACCAAAGAAGTTACCAGGGAAAGTGATATCTCAAGAGTATATTCTGGAGTATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCAGTTGAAGCTGGTGAGCGCGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACACTCTGTGCTGCTATGGATTTACTCGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCCTGTGTAATAGAATTGCCAGAACTGAAGGGGCGTGAACGGTTGAATGGGAAGCCATTGTATGTGTTGGTGGAATACTTGGAAGTATGA 561 0.4545 MSAYRDEDEDPRLHGIKTKIRVVPHFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNINVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYLEV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151044g00005 186 SUPERFAMILY PRTase-like 15 177 IPR029057 -
Stsc151044g00005 186 Gene3D - 3 183 IPR029057 -
Stsc151044g00005 186 FunFam Adenine phosphoribosyltransferase 1 4 183 - -
Stsc151044g00005 186 NCBIfam adenine phosphoribosyltransferase 16 183 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc151044g00005 186 Hamap Adenine phosphoribosyltransferase [apt]. 16 183 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc151044g00005 186 Pfam Phosphoribosyl transferase domain 52 169 IPR000836 -
Stsc151044g00005 186 CDD PRTases_typeI 50 182 IPR000836 -
Stsc151044g00005 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 7 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151044g00005 Stsc-Chr151044 32561 35533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151044g00005 9 182 PRT Gene Family AT1G27450 75.862 5.33e-95 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151044g00005 K00759 - gmx:100306411 349.747