Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151043g00023 ATGGCAATTGGGTTGATGGAGGTGCAGCTTCTCAAAGCAAAGGACCTCAAAGTCACTGATTTCTTTGGTAAAATAGATCCATATGTTGTGATGCAATACAAAGGGCAAGAGAAGAGGAGCACTGTTGCTAATGGGCAGGGAAGAAACCCAGTTTGGAATGAGAAATTTATATTCAGAGCAGAGTACCCAAGTGCATCTGGGGATCAATACAAGCTTATCCTCAAAATCATGGACAAGGACACTTTTTCTAAGGATGATTTTCTTGGCCAAGCCATAATATATGTTAAAGATTTATTGGCCCAAGGTATAGAGAATGGAGGAGCTAAGCTACAATCTCTAAAGTACAGAGTAATTGGTGAAAACAACTCATATTGTGGTGAAATTGATGTTGCTATAACTTTTACCCCTAACCCTAAGGTTGAACAGAAATTTATTGATGAAGATATTGGAGGATGGAAGGAAAGTTCCTACTAG 474 0.3882 MAIGLMEVQLLKAKDLKVTDFFGKIDPYVVMQYKGQEKRSTVANGQGRNPVWNEKFIFRAEYPSASGDQYKLILKIMDKDTFSKDDFLGQAIIYVKDLLAQGIENGGAKLQSLKYRVIGENNSYCGEIDVAITFTPNPKVEQKFIDEDIGGWKESSY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151043g00023 157 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Stsc151043g00023 157 Gene3D C2 domain 2 137 IPR035892 -
Stsc151043g00023 157 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
Stsc151043g00023 157 PANTHER C2 DOMAIN-CONTAINING 3 139 - -
Stsc151043g00023 157 Pfam C2 domain 5 102 IPR000008 -
Stsc151043g00023 157 SMART C2_3c 5 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151043g00023 Stsc-Chr151043 160711 162394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151043g00023 3 110 C2H2 Transcription Factor Family AT4G21160 32.407 2.34e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151043g00023 - - gmx:100791344 231.876