Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151043g00020 | ATGGGTTGCTGCTTCAGTGCAAGGATCAAAGCTGAGAGCCCTCCACGAAATGGTGTGAGTTCAAAAGAAAGTAGAAGAGAAGATGGTTTGAGTGTTTTAAGCAGCAAAGTCTCAATAGTTGCTCCTCCGACTCCCCGGTCCGAGGGCGAGATCTTGAAATCCTCCAATTTGAAGAGCTTCACCTTCGCTGAGCTTAAAACCGCTACACGGAACTTTCGTCCCGACAGTGTGGTGGGAGAAGGTGGTTTCGGTTCTGTATTCAAAGGGTGGATCGATGAGCAGACGCTTGTACCGGTTAAACCCGGTACTGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAGGTGTACAGGGACACAGTGAGTGGTTGACCGAGATAAATTACTTGGGGCAGCTGCATCATCCTAATCTTGTGAAATTGGTTGGTTACTGCTTGGAAGATGATCAAAGGCTTTTGGTGTATGAGTTCTTGACCAAGGGAAGTTTGGATAATCATTTATTTAGGAGGGCTTCTTATGTTCAACCGCTCTCTTGGAGCATTCGGATTAAGGTTGCCCTTGATGCTGCTAAGGGTCTTGCATTTCTCCACAGCGACGAAGCGAAAGTGATATACAGAGACTTCAAAACTTCTAATATATTGCTTGATTCGAGTTACAATGCGAAGCTTTCTGATTTCGGCTTGGCAAAGGATGGACCGGCAGGCGATAAGAGCCATGTCTCTACAAGGGTGATGGGCACATATGGCTATGCTGCACCGGAATACATGGCCACAGGTCACTTGACCAAGAAGAGTGATGTATACAGCTTCGGAGTGGTTCTCTTAGAAATCATGTCCGGAAAACGTGCCCTCGATAACAACAGGCCATCCCGGGAACAGAACTTGATAGAATGGGCCAAGCCTTACCTCAGCAGCAAGCGAAGGATCTTCCAAGTCATGGACGCTCGAATCGAAGGCCAATACACGCTGCGCGAGGTCACCAAAGTAGCTAACCTCGCGATTAGATGCCTATCGGTGGAGCCAAGGTTTCGGCCGAAGATGGAGGAGGTGGTGAGGATATTGGAACATCTGCATGATTCGGAAGAGAAAAGCGGAGAGGGAAGCTCTAGAGGTCAAGATTTGAAGAGGAATGGGCATAGGCATAGCTCAGGAAGCAGTGGCACTAGACAACATAGAAGAAAACATGAAACAGTTACAACAAACAAACAAAAAGAATGA | 1218 | 0.4729 | MGCCFSARIKAESPPRNGVSSKESRREDGLSVLSSKVSIVAPPTPRSEGEILKSSNLKSFTFAELKTATRNFRPDSVVGEGGFGSVFKGWIDEQTLVPVKPGTGMVIAVKRLNQEGVQGHSEWLTEINYLGQLHHPNLVKLVGYCLEDDQRLLVYEFLTKGSLDNHLFRRASYVQPLSWSIRIKVALDAAKGLAFLHSDEAKVIYRDFKTSNILLDSSYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSREQNLIEWAKPYLSSKRRIFQVMDARIEGQYTLREVTKVANLAIRCLSVEPRFRPKMEEVVRILEHLHDSEEKSGEGSSRGQDLKRNGHRHSSGSSGTRQHRRKHETVTTNKQKE | 405 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151043g00020 | 405 | CDD | STKc_IRAK | 78 | 357 | - | - | |
Stsc151043g00020 | 405 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 354 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc151043g00020 | 405 | PANTHER | OS01G0588500 PROTEIN-RELATED | 34 | 358 | - | - | |
Stsc151043g00020 | 405 | MobiDBLite | consensus disorder prediction | 389 | 405 | - | - | |
Stsc151043g00020 | 405 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 354 | IPR011009 | - | |
Stsc151043g00020 | 405 | MobiDBLite | consensus disorder prediction | 10 | 30 | - | - | |
Stsc151043g00020 | 405 | FunFam | Serine/threonine-protein kinase BIK1 | 40 | 157 | - | - | |
Stsc151043g00020 | 405 | ProSiteProfiles | Protein kinase domain profile. | 72 | 357 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151043g00020 | 405 | MobiDBLite | consensus disorder prediction | 359 | 405 | - | - | |
Stsc151043g00020 | 405 | MobiDBLite | consensus disorder prediction | 359 | 380 | - | - | |
Stsc151043g00020 | 405 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 110 | IPR017441 | GO:0005524 | |
Stsc151043g00020 | 405 | Gene3D | Transferase(Phosphotransferase) domain 1 | 158 | 380 | - | - | |
Stsc151043g00020 | 405 | FunFam | Probable serine/threonine-protein kinase PBL8 | 158 | 373 | - | - | |
Stsc151043g00020 | 405 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 157 | - | - | |
Stsc151043g00020 | 405 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 203 | 215 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151043g00020 | Stsc-Chr151043 | 139831 | 143017 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151043g00020 | 50 | 357 | Glycoside Hydrolase | AT3G07070 | 50.323 | 7.32e-108 | 322 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Stsc151043g00020 | PK_Tyr_Ser-Thr | 1.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151043g00020 | - | - | gmx:100775335 | 651.744 |