Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151043g00006 ATGGATTTCCAGGATTTATGCCGGAGCGACGTGCATTGCGTGTTCATCCAGCACGTCCTAGTAATTCAAATTCACTTACTTTCCTCGTCACAGCTCTGGCTGGTGCTTGGTGTTTTCTTAATGGCTACAATGTTGAGGATGTATGCAACGTGTCAACAGCTTCAAGCACAGGCCCAAGCTCACGCAGCAGCAGCTAGTGGGCTGTTAGGCCACACAGAGCTGCGGCTGCATATGCCACCATCAATAGCCCTTGCCACCAGAGGACGCCTACAAGGCCTCAGACTTCAACTTGCACTTCTTGATCGGGAGTTTGATGAACTAGATTATGAAACACTGAGGGCTCTTGATTCTGATAATGTTCCTACTGCACCTTCCATGACCGAGGAAGAGATAAATGCACTTCCAGTACACAAATACAAGGTTTCTGGTCCACAAAACAGTGGCACTGGTTCCTCAATGCAACAGGCTTCATCTTCCACTCCTGCGGAGAAGAAGCAAGATGGTTCAAATGTAGCTGGGAGCATGAAAGCCTCTGATGATGAGCTGACTTGCAGTGTATGTTTGGAGCAAGTTAACATTGGGGATGTACTTCGTAGTTTGCCCTGCTTGCATCAGTTTCACGCGAATTGCATTGATCCCTGGCTGCGACAACAAGGAACATGCCCTGTGTGCAAATTCAGAGCGGGATCTGGGTGGAATGAAAGTGGAGCTAATGATATTGCAGATATGGTTTGA 735 0.4789 MDFQDLCRSDVHCVFIQHVLVIQIHLLSSSQLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDELDYETLRALDSDNVPTAPSMTEEEINALPVHKYKVSGPQNSGTGSSMQQASSSTPAEKKQDGSNVAGSMKASDDELTCSVCLEQVNIGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNESGANDIADMV 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151043g00006 244 PANTHER TARGET OF ERK KINASE MPK-1 24 230 - -
Stsc151043g00006 244 MobiDBLite consensus disorder prediction 142 173 - -
Stsc151043g00006 244 SMART ring_2 184 224 IPR001841 -
Stsc151043g00006 244 SUPERFAMILY RING/U-box 179 228 - -
Stsc151043g00006 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 230 IPR013083 -
Stsc151043g00006 244 MobiDBLite consensus disorder prediction 139 175 - -
Stsc151043g00006 244 Pfam Ring finger domain 183 225 IPR001841 -
Stsc151043g00006 244 CDD RING-H2_PA-TM-RING 183 225 - -
Stsc151043g00006 244 ProSiteProfiles Zinc finger RING-type profile. 184 225 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151043g00006 Stsc-Chr151043 12649 16545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151043g00006 32 244 C3H Transcription Factor Family AT3G55530 75.926 2.24e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151043g00006 K16283 - gmx:100777936 354.755