Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151042g00043 ATGGAAATATTCCGCCCTCAAAATCTAGACGGTCAAGTTGAAAACACCTTGAAAGGCAAGATAAGAATTACCACAAGATGCCTATGGCTTGACCAAGGGAAGCTAATGGATGCACTTCACAAAGCTGCCAATGCTGCCATTTCAAGTTGCCCGGTAAACTGTCCACTGGCTCACATGGAAAGAATTGTGTCTGAGGTGCTGAGGAAAATGGTGAGGAAGTACAGTGGAAAGCGGCCTGAAGTTATTGCCATTGCTGTAGAAAATCCTGCAGCTGTTATTGCTGATGAGGTAAAGACAAAGTTGTCCGGCAAAGCTCATGCGGATGGGATATCAACGTGGAGAAGAGTGTTGGATGGGCATGGGAAGGAAAATAACTCCACTAAAACACGAATTAGAGATGTTGAAGGATTAGCATCTGAAGAAGACACTACCACCTCAAGTGGAGCTGATGATGATATTTCTGAAACAGAGGATCAAGGTGAATTATGGAAGTCATTCATCGATTCCTCACCAGCTGAGAAGTCAATCAAAGCTAACAATGGTTATGTTCCTCAAGAGGAGAATAAGCCCCAACTGAAGAAAGATAACTCTGAAGAAGAAATGTCTGAAATGACATCAAATTCAGAATCCAAATATTCAAAATCTTCAAAGAGAAATAAATGGAAACCTGAGGAAATTAAGAAGCTAATTGATATGCGGGGTAAACTGCATGACCGATTCAAAGTAGTGAAGGGGAGGATGGCCCTTTGGGAAGAAGTATCTCAGAACTTGTTGGAAAATGGGATCAGCAGAAGTTCTGGGCAGTGCAAATCTCTATGGACATCGTTGTTGCAGAAATATGAGGAGGTCAAAAATGAGAAGAATACCAAGAAAAAGTGGCCATATCTTGAGGACATGGAGAAGATTCTATCTGAAAATGAGGAACTGGCAACAAAATGA 939 0.4164 MEIFRPQNLDGQVENTLKGKIRITTRCLWLDQGKLMDALHKAANAAISSCPVNCPLAHMERIVSEVLRKMVRKYSGKRPEVIAIAVENPAAVIADEVKTKLSGKAHADGISTWRRVLDGHGKENNSTKTRIRDVEGLASEEDTTTSSGADDDISETEDQGELWKSFIDSSPAEKSIKANNGYVPQEENKPQLKKDNSEEEMSEMTSNSESKYSKSSKRNKWKPEEIKKLIDMRGKLHDRFKVVKGRMALWEEVSQNLLENGISRSSGQCKSLWTSLLQKYEEVKNEKNTKKKWPYLEDMEKILSENEELATK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151042g00043 312 MobiDBLite consensus disorder prediction 178 219 - -
Stsc151042g00043 312 MobiDBLite consensus disorder prediction 118 160 - -
Stsc151042g00043 312 MobiDBLite consensus disorder prediction 118 139 - -
Stsc151042g00043 312 CDD GT1 221 284 - -
Stsc151042g00043 312 Gene3D - 221 282 - -
Stsc151042g00043 312 MobiDBLite consensus disorder prediction 188 205 - -
Stsc151042g00043 312 Pfam Myb/SANT-like DNA-binding domain 218 302 IPR044822 -
Stsc151042g00043 312 PANTHER RIBONUCLEASE J 1 312 - -
Stsc151042g00043 312 ProSiteProfiles Myb-like domain profile. 213 277 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151042g00043 Stsc-Chr151042 335673 338292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151042g00043 220 304 Trihelix Transcription Factor Family AT2G38250 31.034 5.04e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc151042g00043 Myb_DNA-bind_4 3.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151042g00043 - - gmx:100814619 434.491