Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151042g00038 ATGTCTCCACAAAATTCATCTTGTGTCTTGCAGTCAAAGAATGATGACCAAGAAGCAGATGGAGAGAACAATGCACAAGGGTGGAACATCAAAATGTCTAGATGGGCTTCTGATGGTCAATCACCGGTGGGTGCTGTTGATGAATTTAATTCTGGCAAATTGAAGTCAAGTCCCGAGATTGGTGAATTTCAAAGAGAATGTTCAGAAAGCACAATCACGAGATCCTCGGGAAGCAATGGACTAGATAATAGTGGGGGCCGTTTTGACGATAGTGATTCTGAAAAGGAGTTCTCTACGGACTCCATGGTTGATGCTGAGGAACGGAGTGATGTTGGTGATTATGCATCTGATTCTGATGAAGATGCTGGTTTAATGAACACACACAGAAATATAAACATGCTTCAGAGTTGTAGAAGTGTGTGCGAGTTTGAAATGATTAAGAAAATCAATGAAGGAACTTACGGTGTTGTCTACAAGGCTAGGGATAAGAAGACTGGAGAAATACTAGCATTGAAGAAGGTGAAGATGAATATAGAAAGGGATGGCTTTCCATTGTCATCCTTGAGGGAAATTAACATTCTCTTGTCTTTCGATCACCCCTCCATTGTGGATGTTAAAGAAATAGTTGTGGATAATTATGATGGTACTTTCATGGTGATGGAGTACATGGAGCATGACCTTAAGGGGCTGATGGAGGCAAAGAAGCAGCCCTTCAGTATGGGTGAAATTAAATATTTGATGCTGCAACTTCTTGAAGGTGTCAAGTATCTCCATGACAATTGGGTTCTTCATAGGGACTTAAAGACATCAAACATTCTGCTGAACGACAAGGGGGAGCTGAAAATATGCGACTTTGGGTTGTCCCGGCAATTTGGAAGCCCACTTAAGCCATATACTCCTCTTGTTGTGACACTATGGTACAGGGCTCCCGAGCTTTTGTTAGGAGCTAAAGAATATTCAACTGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCCGAGTTGGTTGCCAAGGAACCTCTGTTCACGGGTAGAACTGAACTTGAACAAATTGATAAGATTTTTAGGACCCTGGGTACACCTGATGAGAAAATTTGGCCGGGATTATCCAAATTACCTGGTCCTAAAGCAAAATTTGTTAAACAACCATATAATATGCTAAGGAAGAAATTTCCAGCTACATCTTTTACTGGTTCACCAGTTCTATCTGAGCTAGGATTTGACTTGTTAAAGAAGCTTCTAACTTACAATCCAGAAGAGAGGATAAGTGCAGAAGAAGCCCTTCTTCATGATTGGTTCCATGAAGTCCCCCTTCCAAAATATGATTTCAAGCCTATTTTCCCTTCTTTGCGTGGCTAG 1359 0.4135 MSPQNSSCVLQSKNDDQEADGENNAQGWNIKMSRWASDGQSPVGAVDEFNSGKLKSSPEIGEFQRECSESTITRSSGSNGLDNSGGRFDDSDSEKEFSTDSMVDAEERSDVGDYASDSDEDAGLMNTHRNINMLQSCRSVCEFEMIKKINEGTYGVVYKARDKKTGEILALKKVKMNIERDGFPLSSLREINILLSFDHPSIVDVKEIVVDNYDGTFMVMEYMEHDLKGLMEAKKQPFSMGEIKYLMLQLLEGVKYLHDNWVLHRDLKTSNILLNDKGELKICDFGLSRQFGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELVAKEPLFTGRTELEQIDKIFRTLGTPDEKIWPGLSKLPGPKAKFVKQPYNMLRKKFPATSFTGSPVLSELGFDLLKKLLTYNPEERISAEEALLHDWFHEVPLPKYDFKPIFPSLRG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151042g00038 452 FunFam cyclin-dependent kinase G-2 isoform X1 128 224 - -
Stsc151042g00038 452 Gene3D Transferase(Phosphotransferase) domain 1 225 443 - -
Stsc151042g00038 452 MobiDBLite consensus disorder prediction 87 112 - -
Stsc151042g00038 452 CDD STKc_CDC2L1 137 433 IPR045267 GO:0004674|GO:0005524|GO:0006468
Stsc151042g00038 452 FunFam Cyclin-dependent kinase G-2 225 452 - -
Stsc151042g00038 452 ProSiteProfiles Protein kinase domain profile. 143 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151042g00038 452 MobiDBLite consensus disorder prediction 21 36 - -
Stsc151042g00038 452 PANTHER CELL DIVISION PROTEIN KINASE 142 439 - -
Stsc151042g00038 452 SMART serkin_6 143 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151042g00038 452 Gene3D Phosphorylase Kinase; domain 1 125 224 - -
Stsc151042g00038 452 SUPERFAMILY Protein kinase-like (PK-like) 137 439 IPR011009 -
Stsc151042g00038 452 MobiDBLite consensus disorder prediction 1 120 - -
Stsc151042g00038 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Stsc151042g00038 452 Pfam Protein kinase domain 143 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151042g00038 452 MobiDBLite consensus disorder prediction 63 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151042g00038 Stsc-Chr151042 307690 311138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151042g00038 138 439 Core Cell Cycle Gene Families AT5G10270 45.597 8.08e-85 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Stsc151042g00038 Pkinase 2.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151042g00038 K08818 - gmx:100814438 684.871