Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151042g00031 ATGTCTCCTGCTCCTTATAGAGGTTGTGGCTTCAAACGCGAGTTCATCAGCGATGAAATAATAACTACCCCTATATCATCATCAATGCAAGATCCTAATTCTTGCATAATCTTCTATTCATGTCCCAACCTATCCCACTTGGATGATACTACTTGTTTGACTTCATTCCCTTCCACCGCCATCAAAGACCGTTTTACCCCCGAAGAGAAAAGAATCTTGGACAACACTTGTTTCTTCAATTGGACTACTTCTTCTTCTTCTTCGGAATTATTAGAAACCTCATCAGAAACTAAAAGGCTAAAAAGAACCACAAGCTTCCCAGTTTCTTTAGAAAACCTTTCAATAACCCCGCTCTACTTCAATTACAATAAAAATAGTGGCAACAACCAAAGCAATCACATCGTCAGAGATCACATAAGAAGTTGTTCGCAGGTCTACCGTGCTGCAGAAGCAGTTGAAGAGGCGGCGCAAGACATCATTAATAACTCCGAAGAACAAGAAGAAGACGGCTGCGATGGAATGAGGCTTGTTCAACTTCTAATCTCTTGCGCCGAAGCCGTCGCGTGCCGTGACAAATCTCACGCTTCGATTCTTCTATCAGATCTTAAGTCTAGCGCCTTGGTCTTCGGCTCTTCGTTCCAGCGAGTAGCCTCCTGCTACGTGCAGGGCTTGTCCGAGCGATTATCTTCGATCCAGCCGTGTCTTGGTCCGGTGCCGGCGATGCAACCGATGATGAACATAATGGACGCCGCATCGGAGAAGATGGAAGAAGCTTTCAGGCTGGTGTATGAGATTTGTCCACATATTCGGTTCGGACATTTCGTGGCAAATTCCGCGATAGTGGAAGCCTTTGAGGGTGAGAGTTTTGTCCACGTGGTAGACCTCGGCATGAGCCTGGGCCTACCACATGGTCATCAATGGCGGGGCCTGATCCAGTCCCTGGCCAACCGCGCCGGAGCCCGCGTTCGTAGGCTCCGGATAACCGCAGTTGGCCTCTGTATTGGCAGGCTCCGCGTCATTGGTGATGAACTCTCAGTTTACGCGAATAACATGGGAATCAACTTTGAATTCTCCGTTGTGCAGAAAAATCTAGAGAATCTGAAGGCTGAGGATGTGAAAAAAGAAGAGGATGAGGTTCTTGTGGTGAATAGTATCCTTCAGCTGCATTGTGTTGTTAAAGAAAGCCGTGGAGCTTTGAACTCTGTGCTTCAGATGATTCACGGGCTTTCGCCGAAGGTTTTGGTTATGGTGGAGCAGGATTCGAGTCACAATGGACCCTTTTTTCTTGGGAGGTTTATGGAATCATTGCACTACTACTCTGCAATATTTGATTCGCTTGATGTGATGCTGCCAAAGTATGATACGAAGAGGGCGAAGATGGAGCAGTTTTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGCGAGGGGCCACATCGGATGGAGAGGCATGAGAGGGTGGACCAGTGGCGGAGGAGGATGAGCAGGGCGGGGTTTCAGGGCTCCCCTATTAAGATGGTGGCTCAGGCAAAGCAGTGGCTTGTGAAGAACAATGTTTGTGATGGTTACACTGTTGTTGAAGAGAAAGGGTGCTTGGTTCTTGGTTGGAAATCAAAGCCTATTGTTGCAGCTTCTTGTTGGAAGTGTTGA 1650 0.4733 MSPAPYRGCGFKREFISDEIITTPISSSMQDPNSCIIFYSCPNLSHLDDTTCLTSFPSTAIKDRFTPEEKRILDNTCFFNWTTSSSSSELLETSSETKRLKRTTSFPVSLENLSITPLYFNYNKNSGNNQSNHIVRDHIRSCSQVYRAAEAVEEAAQDIINNSEEQEEDGCDGMRLVQLLISCAEAVACRDKSHASILLSDLKSSALVFGSSFQRVASCYVQGLSERLSSIQPCLGPVPAMQPMMNIMDAASEKMEEAFRLVYEICPHIRFGHFVANSAIVEAFEGESFVHVVDLGMSLGLPHGHQWRGLIQSLANRAGARVRRLRITAVGLCIGRLRVIGDELSVYANNMGINFEFSVVQKNLENLKAEDVKKEEDEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPHRMERHERVDQWRRRMSRAGFQGSPIKMVAQAKQWLVKNNVCDGYTVVEEKGCLVLGWKSKPIVAASCWKC 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151042g00031 549 Coils Coil 146 169 - -
Stsc151042g00031 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 543 IPR005202 -
Stsc151042g00031 549 ProSiteProfiles GRAS family profile. 167 548 IPR005202 -
Stsc151042g00031 549 Pfam GRAS domain family 176 548 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151042g00031 Stsc-Chr151042 223474 225123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151042g00031 172 548 GRAS Transcription Factor Family AT1G14920 36.788 1.59e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc151042g00031 GRAS 6.9e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151042g00031 - - adu:107491113 862.833