Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151042g00012 ATGGTTGCCCACACCATAGCCATCCACTACCACACCGATCGGATCTTACCCGAACCGGATGTCTTCATTCACACCTCCGCCGGAACACGCATTCCAGCCCACTCTACTATTCTGGCTTCTGTGTCGCCGGTTTTGGAGAACGTCATAGACCGCCCGCGAAAACATCGCAGCTCCGAAAGAATCATCCAGATTCACGGCGTTCCCTGCGAAGCCGTAGCCGCCTTCGTCACCTTCATCTACACCTCCAGGTGCACGGAGGAGCAGATGGACAAGTACGGGGTTCACCTGTTGGCATTGTCGCACGTGTACAACGTGCCGCAGCTGAAGCAGAGGTGTACGAAGGGGCTGGCACAGCGGTTGACGGTGGAGAACGTGGTGGACTTGCTGCAGCTGGCGCGTCTGTGCGACGCGCCGGATCTAGACGTGAGGTGCATGAGGCTGCTGACGCGGCACTTCAAGGCGGTGGAGGACACCGAAGGGTGGAAGTTCGTTAGCAGCAACGATCCCTGGCTTGAACTCGATATCCTTCGCTTCATCGATGAACAAGAAACGAGGAAAAAGAAATGCAAGAAGCACAGGGAAGAGCAGAGGGTGTATTTTGAGTTAAGCGAAGCCATGGACTGCTTGGAACACATATGCACCGAAGGATGCACTGAGGTGGGGCCATGCCACGTGGACACCACCACCAGAAAGGAAAGGAGGAAGCCCTGCAGCAGATTCGACACGTGTCACGGCCTGCAGCAATTGATTCGGCATTTTGCCACATGTGAGAAGAGGATGAACCGGGGGTGCTTGCGGTGCAAGCGAATGTGGCAGCTCTTCAAGTTACATGCCTACGTATGCAACCAAACTGATTCTTGCAAGGTTCCTCTCTGCAGGCAAATTCAATTGAAGATGCAACAAGAGAAGAGAAAAGACGATTCAAGGTGGAAATTACTTGCGAAGAAGGTGGCCTCAGCCAGAGTCATATCTTCTTTGTCTCTTCCGAAGAGAAAGCGTGATGAGGAAATTAAAGTCACCGTGGACAATAATGGCTTCACTAGTTTCGAATTACATTGA 1059 0.5279 MVAHTIAIHYHTDRILPEPDVFIHTSAGTRIPAHSTILASVSPVLENVIDRPRKHRSSERIIQIHGVPCEAVAAFVTFIYTSRCTEEQMDKYGVHLLALSHVYNVPQLKQRCTKGLAQRLTVENVVDLLQLARLCDAPDLDVRCMRLLTRHFKAVEDTEGWKFVSSNDPWLELDILRFIDEQETRKKKCKKHREEQRVYFELSEAMDCLEHICTEGCTEVGPCHVDTTTRKERRKPCSRFDTCHGLQQLIRHFATCEKRMNRGCLRCKRMWQLFKLHAYVCNQTDSCKVPLCRQIQLKMQQEKRKDDSRWKLLAKKVASARVISSLSLPKRKRDEEIKVTVDNNGFTSFELH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151042g00012 352 Gene3D TAZ domain 193 320 IPR035898 -
Stsc151042g00012 352 SMART TAZ_2 196 293 IPR000197 -
Stsc151042g00012 352 FunFam BTB/POZ and TAZ domain-containing protein 2 192 321 - -
Stsc151042g00012 352 SUPERFAMILY TAZ domain 194 296 IPR035898 -
Stsc151042g00012 352 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
Stsc151042g00012 352 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Stsc151042g00012 352 Gene3D - 121 192 - -
Stsc151042g00012 352 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 18 334 IPR044513 -
Stsc151042g00012 352 SMART BTB_4 19 120 IPR000210 GO:0005515
Stsc151042g00012 352 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Stsc151042g00012 352 CDD BACK 121 168 - -
Stsc151042g00012 352 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Stsc151042g00012 352 Pfam TAZ zinc finger 203 292 IPR000197 -
Stsc151042g00012 352 SUPERFAMILY POZ domain 20 118 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151042g00012 Stsc-Chr151042 67723 71278 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc151042g00012 BTB 3.5e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151042g00012 - - cam:101496955 550.051