Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00052 ATGGTTTCAGCTAGTGGAACTTTTGCACTGGGATTCTTCAATAGCAAAGAAGATTCCATGAAAAGTTATCTTGGAATATGGTACAAAGAAGTAGTACCTATGACAGTAGTATGGGTTGCCAACAGAAACAATCCCCTCAATGATTCATCAGGGATCTTGAAGATCACTGATAAAGGATTGCTTGTTCTTCTAAACAACAACAATAGCATCTTTTGGTCTTCCAACTCATCATCGAATTCGATACAACAACCAGTTGCGTTGCTTTTGGATACAGGAAACCTCATTGTGAACACCAGTAACAAAGAGTCAGGATATATTCTTTGGCAGAGTTTTGATTACCCTTTTGACACTCTACTTCCGGGGATGAAGCTGGGAAGCGATTTAACTACAGGCCTAATTAGGAACCTAACATCACAGAATAGCCCTGATGATCCTTCTAAAGGTAACTATACCTTTCAGCTTGATATTGTTGGATATCCACAATTATGTATAAGACATGGTGAATCCATAACCTATTGTAGTGGATCTTGGAATGGTCTTCGATTCGGCGGGATTCCACAGCTAAAACTGAACAGGATATACCACTATTTCTTTGTTTACAGCAAGGAAGAGATATATTATACATTTGAGCTTCTTAACAGCTCAGTGTATTCAAGGTTTGTGCTATCTGCAGATGGAATCATGACGCGTTATGTTTGGAGTGCGGAGAACCAAAGTTGGACACCCTATCTAAAATTACCAAGCGAATTCTGTGATGATTATGCTAAATGTGGACCATATGGTAAATGTAATGGAGACAACTCTCCTCCATGTGAATGCTTGAATGGAACTGTACCTAAAGTCCCTGAAGAATGGGATCAGACAGATTGGTCTAATGGTTGTACTAGAAGTAATCCGCTAAGCTGCAATGGAGATGGATTCAAGAGGTGTACTGGTCTGAAGCTGCCTGATACACATAGAACATCATGGTTAAATACTAGCATGAGTCTTGACGAGTGCGCGAAGCTCTGCTTGAAAAATTGCTCCTGCATGGCTTATGCTGCATTGGATATCAGCAAAGAGGCTGCAGGTGGGTGTTTAATGTGGTATGGTGAGCTGATAAATATTAGAGTGCTGAGTGAGCCACAACAAGATTTTTATGTCAGAATGTCCAAGAAAGATTCAGATGAAAATGAAAAGTTAACCGGTAAATCTGATATCCCGAAGAAGCGGATTATTGTTTTGAGCTTAGTCTTAGTTATAGTCATTATGATCATATGCATCTCCTTGATCCTCTATAAGAGAAAGAAGAACCAGAGAAACTATAGAAACATGAGAGGCAATCCAGAAGAGAATCAGGAGGAAGAACTAGATCTACCATATTTTGATATGGCTACACTAATTTCTGCAACCAACAACTTCTCCACCAATAACATATTGGGAAAAGGCGGTTTTGGAGCTGTTTACAAGGGTGTGTTGGAAGATGGAAGAGAAATAGCTGTTAAGAGGCTTTCAGAAAACTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGGAGAAGAAAGGATTCTAGTCTATGAGTTCATGCCAAATAAAAGCTTGGACTACTTCATATTTGATGAAGAGAGAGGCAAGTTATTAGACTGGCCTAAGCGCTTCGCTATTATTATTGGGATCGCGCGAGGCCTTCTCTACCTCCATCAAGATTCAAGACATAGAATAGTCCATAGAGATATCAAGGCCGGCAATGTTTTGATAGATGATGAAATGAACGCCAAGATCTCCGACTTTGGACTAGCCAGAAGCCTTGTAGGAAATGAAAATGAAGCAAACACAGCAACTGTTGTTGGAACCTATGGCTATCTATCTCCAGAGTACCTTATCGACGGAATATTCTCGACAAAATCCGATGTCTATAGCTTTGGAGTGCTAGTGTTAGAGATAGTTACTGGGAAGAGAAATAGAGGCTTCAGCAATGAAAATCATCGCTTTAATCTTCTAGGACATGTGTGGACTCTGTTCATAGATGGTAAGTGTTCAGAAATAGTTGATGGATCAATCAGAGGTGATGATGAATCTAATTTATCAGAAGTCATAAGAGCAATTCATGTGGGTCTGCTATGTGTTCAAAGGAGTCCAGAGGATAGGCCAAGCATGTCATATGCAATTATGATGCTGAGTAGTGAATGGGCACTGCCTCAGCCAAAAATACCTGGCTTCTTTGCTGAGAGAGATCCTGTTGGTGTAACTTCTTCATCAAGAAACACTAATGTGTCAGTTAATGAAGTCACAATTAGTGAGTTGCATCCAAGGTAG 2358 0.4008 MVSASGTFALGFFNSKEDSMKSYLGIWYKEVVPMTVVWVANRNNPLNDSSGILKITDKGLLVLLNNNNSIFWSSNSSSNSIQQPVALLLDTGNLIVNTSNKESGYILWQSFDYPFDTLLPGMKLGSDLTTGLIRNLTSQNSPDDPSKGNYTFQLDIVGYPQLCIRHGESITYCSGSWNGLRFGGIPQLKLNRIYHYFFVYSKEEIYYTFELLNSSVYSRFVLSADGIMTRYVWSAENQSWTPYLKLPSEFCDDYAKCGPYGKCNGDNSPPCECLNGTVPKVPEEWDQTDWSNGCTRSNPLSCNGDGFKRCTGLKLPDTHRTSWLNTSMSLDECAKLCLKNCSCMAYAALDISKEAAGGCLMWYGELINIRVLSEPQQDFYVRMSKKDSDENEKLTGKSDIPKKRIIVLSLVLVIVIMIICISLILYKRKKNQRNYRNMRGNPEENQEEELDLPYFDMATLISATNNFSTNNILGKGGFGAVYKGVLEDGREIAVKRLSENSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQGEERILVYEFMPNKSLDYFIFDEERGKLLDWPKRFAIIIGIARGLLYLHQDSRHRIVHRDIKAGNVLIDDEMNAKISDFGLARSLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFSNENHRFNLLGHVWTLFIDGKCSEIVDGSIRGDDESNLSEVIRAIHVGLLCVQRSPEDRPSMSYAIMMLSSEWALPQPKIPGFFAERDPVGVTSSSRNTNVSVNEVTISELHPR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00052 785 ProSiteProfiles Protein kinase domain profile. 467 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00052 785 PIRSF SRK 1 785 IPR024171 GO:0004674
Stsc151041g00052 785 SUPERFAMILY Protein kinase-like (PK-like) 449 740 IPR011009 -
Stsc151041g00052 785 Pfam D-mannose binding lectin 35 139 IPR001480 -
Stsc151041g00052 785 CDD PAN_AP_plant 299 382 - -
Stsc151041g00052 785 ProSiteProfiles PAN/Apple domain profile. 302 384 IPR003609 -
Stsc151041g00052 785 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 731 - -
Stsc151041g00052 785 CDD STKc_IRAK 473 740 - -
Stsc151041g00052 785 SMART ntp_6 302 383 IPR003609 -
Stsc151041g00052 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 36 145 IPR036426 -
Stsc151041g00052 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 543 748 - -
Stsc151041g00052 785 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Stsc151041g00052 785 Pfam Protein tyrosine and serine/threonine kinase 469 736 IPR001245 GO:0004672|GO:0006468
Stsc151041g00052 785 Pfam Domain of unknown function (DUF3403) 741 785 IPR021820 GO:0004674
Stsc151041g00052 785 Gene3D Hepatocyte Growth Factor 300 383 - -
Stsc151041g00052 785 Gene3D - 1 111 IPR036426 -
Stsc151041g00052 785 SMART serkin_6 467 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00052 785 ProSiteProfiles Bulb-type lectin domain profile. 1 109 IPR001480 -
Stsc151041g00052 785 SMART blect_4 2 114 IPR001480 -
Stsc151041g00052 785 Pfam PAN-like domain 302 369 IPR003609 -
Stsc151041g00052 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 430 542 - -
Stsc151041g00052 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Stsc151041g00052 785 Pfam S-locus glycoprotein domain 172 280 IPR000858 GO:0048544
Stsc151041g00052 785 Gene3D Phosphorylase Kinase; domain 1 427 542 - -
Stsc151041g00052 785 Gene3D Transferase(Phosphotransferase) domain 1 543 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00052 Stsc-Chr151041 332205 335173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00052 395 785 Receptor kinase-like Gene Family AT4G21410 48.030 2.43e-114 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00052 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00052 - - adu:107462372 1119.76