Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00050 ATGGAAGTGTTTATCACAATAAGCTTCCTCATCCTCATCTCTGTTCTACTGCTATGGCTTGCAAAGAAGGATAAGAGGGACCATAAAATGCCACCTGGGCCATGGAAATTACCCATCATAGGGAACCTGCATCAACTCGTAGGCTCATCATCACTTCCACATCATGCTCTCACAAAGCTATCACAAAATCACGGTCCACTGATGCAGGTTCAACTGGGTGAAATTTCAGCAGTGATTGTTTCTTCCCCCAACATGGCCAGAGAAATCATGAAGGCTCATGATCTTGCTTTTTCAGAAAGGCCTGAGTTCCTTCCTTCCAAGATCATAGCCTATGGATCAACAAACATTGCATTCGCTCCCTATGAGGAGGTAGCTAACATGATAGAAACAATTCACATATCCGCTGGTGAAACCATCAATCTCAGTAAAATGATTCACAATCTCATAACCACTGTGGTTTCTAGAGCTGTGTTTGGCAACTTATCTCAAGACCATGAACAGTTTGTGTCCTTTGTGAAGAAGTCAATAGCTTTATCCGACGGATTCGACCTTGCGGATTTGTTTCCTTCCTTCAAACCTCTTCATTTCATCACTGGTATGGAAGCCAAACTGTATGAGATGCATGTCAAGATGGACAAGATCCTAGACAAGATCATAAAGGAGATTGAAGAAAGGAAATTGGAAGATAATACACAGCATGAGCAACAAGAAAAGAACGAGAATCTTGTTGAGGTTCTTTTAAGAGTCCAACATAGTGACACCCTTGACACCCAGATTACACTGAACAATGTCAAAGCGGTCATTTTGGACATGTTTTTTGCTGGAACAGATACTTCAAGTGTAGTTGTAGAGTGGGCTATGTCGGAATTGATGAGAAATCCGAGAGCTATGAAGAAGGCACAGGCCGAGATTCGACATGCTTGGAGAGGAAAGCAAACAATCCAGGAGGCAGATGTATCAGAGCTTCCATACTTAAAGGCCGTGATCAAGGAAACAATGAGGTTACACCCTCCTCTTCCTCTGATGCTTCCAAGACAAGCCAGAGAAGATTGCACCATCAACGGATACCATATACCGATCAATACTAAGGTAATGATAAATGTGTACGCGCTCGGAAGAGATCCAGATAACTGGTACGATGCAGAAAGCTTCCTACCAGAAAGGTTTGAGAAGAATCCTATGGATTTCAAAGGGACAAATTTCGAGTACATACCTTTTGGAGCAGGAAGGAGAATGTGTCCGGGGCTTAACTTTGGTTTGGCTAACGTGGAGTTTGCTCTAGCTATGCTACTGTACCACTTCAACTGGGAACTCCCTGAAGGAATTAAGGCAGAGGATTTGGATATGAATGAAGCACAGGGAGCCACCGCTGGAAGGAAAAATCCCCTTCACTTCATTCCCACACCTTACCATTTATCGTAG 1422 0.4325 MEVFITISFLILISVLLLWLAKKDKRDHKMPPGPWKLPIIGNLHQLVGSSSLPHHALTKLSQNHGPLMQVQLGEISAVIVSSPNMAREIMKAHDLAFSERPEFLPSKIIAYGSTNIAFAPYEEVANMIETIHISAGETINLSKMIHNLITTVVSRAVFGNLSQDHEQFVSFVKKSIALSDGFDLADLFPSFKPLHFITGMEAKLYEMHVKMDKILDKIIKEIEERKLEDNTQHEQQEKNENLVEVLLRVQHSDTLDTQITLNNVKAVILDMFFAGTDTSSVVVEWAMSELMRNPRAMKKAQAEIRHAWRGKQTIQEADVSELPYLKAVIKETMRLHPPLPLMLPRQAREDCTINGYHIPINTKVMINVYALGRDPDNWYDAESFLPERFEKNPMDFKGTNFEYIPFGAGRRMCPGLNFGLANVEFALAMLLYHFNWELPEGIKAEDLDMNEAQGATAGRKNPLHFIPTPYHLS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00050 473 CDD CYP71-like 64 463 - -
Stsc151041g00050 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Stsc151041g00050 473 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 Pfam Cytochrome P450 122 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 Pfam Cytochrome P450 31 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 SUPERFAMILY Cytochrome P450 31 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 Gene3D Cytochrome P450 17 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00050 473 Coils Coil 219 239 - -
Stsc151041g00050 473 PANTHER OS08G0105600 PROTEIN 55 123 - -
Stsc151041g00050 473 FunFam Os06g0641600 protein 161 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00050 Stsc-Chr151041 326395 328006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00050 7 470 Cytochrome P450 AT3G26300 38.569 8.45e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00050 - K15472 gmx:100800554 571.237