Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00048 ATGGAAAGGCTCACCTTGCTTCTGTTGTGCTTCTTATGGCTGCATGATATAGCAGTTTCCACTACCATAGAAAGCATTAGTACTACACAGTCCCTCACTGATGGTGACACCATGGTTTCAGATGATGGAACCTTTGCAGTTGGATTCTTTAGTATCCCAGAAAGTTCCATGAACCGTTACCTCGGAATATGGTACAACAAAGTGCCATCTATGACAGTAGTATGGATTGCCAATAGAAACACTCCGCTTAATGACTCATCCGGGGTCTTGAAGATCACTGGCAGCGGAACTCTTGCTCTTTATAGTCATAACCATACCATCATTTGGTATTCCAACCCATCAAGATTCGCACAGCAACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAAGATGGGAGCAATGATGATGATCCAAAGAGTTATCTTTGGCAGAGTTTTGATTACCCTTATGACACACTACTGCCAGGGATGAAACTGGGAATTGACTTAAGTACAGGCCTTCAAAGGTACCTAACATCACCGGTTAGCCCTGATGATCCTTCTGAAGGTAACTATACCCTTCAGCTTGATATTGCTGGATATCCACAATTTTGTATAAGAAATGGCCAATTAGCTATATATTGTAGTGGACCTTGGAACGGTCTTCGGTTTGACGGAATTCCCCAGTTAAAACTTAATTCTATATACAACTATGACTTTGTTTACAACAAGGAAGAGATATATTACGCATTTGAGCTTTATAATAGCTCGGTATATTCAAGGTTTGTGCAAAATTCATACGGATCAATGGTTCGTTATGTGTGGAGTGTTAACAATAAGAGTTGGTCTGTCTATCTAACATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGCAGCTGTGATGTATCCAATTCCCCTGTGTGTAGTTGCCTATTGAAAGGATTTGAACCTAAAGTCCCTGAAGAATGGAATCAGACAGATTGGTCTAATGGTTGTGTTAGAATCAATAACTTGAGTTGCCAGGGTGATGGATTTGTGAAGTTGCCTGGTTTGAAGTTACCAAACACAGAAAGGGCATCATGGTTGAACAATAGCATGAGTCTTGATGAGTGTGCTAATTTATGTATGAAGAATTGTTCCTGCATAGCTTATGCTGCCTTTGATATCAGGGGAAGTGGGTGTTTATTCTGGTATGGTGAGCTGATAGATATTAGAGTGCTGAGTAGTCCACAGCAAGATCTTTATGTCAGAATGTCAAAGAAAGATATAGGAAACATGTCGACAAACAACCCAGAAAGATATGCACATGCATTACAAGAGCATGCGGAAGAAGAACTTGATCTACCATTGTTTGATATGGCTACACTTATTGTTGCAACCAATAACTTCTCCACCAATAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAAAGATGGAAGAGAAATAGCTGTTAAGAGGCTCTCAAAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTAATGCATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGATGTTGCATTCAAGAAGAAGAAAGGATTCTGGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAAAGAGAGAAGCAAGCAACTACTTTGGCCTCAGCGTTTCCTTATTATCACTGGGATTGCACGGGGCCTTCTCTATCTCCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAGGCTAGCAATGTTCTGCTAGATGGCGAAATGAACGCCAAAATCTCTGATTTTGGACTAGCTAGAAGCTTTATCGGAAATGAAAATGAAGCAGCAAACACTACAACAGTTGTTGGAACTTATGGCTATCTATCACCAGAGTACCTAATTGATGGAATCTTCTCAACAAAGTCCGATGTCTATAGCTTTGGTGTGCTTGTATTAGAGATAATTAGTGGAAAAAGAAATAGAGGATACCATGATAAAAATAATCGCTTTAATCTTCTTGGGCATGTATGGACACTCTTCAAAGAAGACAATTGCTCAGAAATAGTTGATACGTCCATAAAAAATTCGTCCGATTTACCTGGAGTCATAAGAGCAATTCATGTGGGTCTACTCTGTGTTCAGCAGAATCCAGAAGACAGGCCAAGCATGTCGCATGCTCTTATGATGCTGAGTAGCGAATGGACACTGCCTCAACCAAAAATGCCAGGGTTCTTTACAGAGAGAGATCCTGTTGGTGACACTTCTTCGTCAAGCAATATTAAACATCTATCAGTTAACGGAATCACAGTTAGTATGGTGCATCCGCGGTAG 2352 0.4005 MERLTLLLLCFLWLHDIAVSTTIESISTTQSLTDGDTMVSDDGTFAVGFFSIPESSMNRYLGIWYNKVPSMTVVWIANRNTPLNDSSGVLKITGSGTLALYSHNHTIIWYSNPSRFAQQPVAVLLDSGNLIVKEDGSNDDDPKSYLWQSFDYPYDTLLPGMKLGIDLSTGLQRYLTSPVSPDDPSEGNYTLQLDIAGYPQFCIRNGQLAIYCSGPWNGLRFDGIPQLKLNSIYNYDFVYNKEEIYYAFELYNSSVYSRFVQNSYGSMVRYVWSVNNKSWSVYLTLPTDICDDYGKCGAYGSCDVSNSPVCSCLLKGFEPKVPEEWNQTDWSNGCVRINNLSCQGDGFVKLPGLKLPNTERASWLNNSMSLDECANLCMKNCSCIAYAAFDIRGSGCLFWYGELIDIRVLSSPQQDLYVRMSKKDIGNMSTNNPERYAHALQEHAEEELDLPLFDMATLIVATNNFSTNNILGKGGFGTVYQGMLKDGREIAVKRLSKDSRQGLQEFKSEVMHVVKLQHRNLVKLLGCCIQEEERILVYEFMPNKSLDYFIFDKERSKQLLWPQRFLIITGIARGLLYLHQDSRHRIVHRDLKASNVLLDGEMNAKISDFGLARSFIGNENEAANTTTVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIISGKRNRGYHDKNNRFNLLGHVWTLFKEDNCSEIVDTSIKNSSDLPGVIRAIHVGLLCVQQNPEDRPSMSHALMMLSSEWTLPQPKMPGFFTERDPVGDTSSSSNIKHLSVNGITVSMVHPR 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00048 783 SMART blect_4 29 153 IPR001480 -
Stsc151041g00048 783 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Stsc151041g00048 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 150 - -
Stsc151041g00048 783 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 728 - -
Stsc151041g00048 783 Gene3D Transferase(Phosphotransferase) domain 1 541 743 - -
Stsc151041g00048 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 429 540 - -
Stsc151041g00048 783 Gene3D Phosphorylase Kinase; domain 1 426 540 - -
Stsc151041g00048 783 SMART ntp_6 342 420 IPR003609 -
Stsc151041g00048 783 CDD PAN_AP_plant 339 419 - -
Stsc151041g00048 783 SMART serkin_6 465 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00048 783 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Stsc151041g00048 783 ProSiteProfiles PAN/Apple domain profile. 342 421 IPR003609 -
Stsc151041g00048 783 SUPERFAMILY Protein kinase-like (PK-like) 449 765 IPR011009 -
Stsc151041g00048 783 Gene3D Hepatocyte Growth Factor 339 419 - -
Stsc151041g00048 783 CDD B_lectin 29 153 IPR001480 -
Stsc151041g00048 783 Pfam D-mannose binding lectin 72 177 IPR001480 -
Stsc151041g00048 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Stsc151041g00048 783 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Stsc151041g00048 783 Pfam Domain of unknown function (DUF3403) 738 783 IPR021820 GO:0004674
Stsc151041g00048 783 Pfam PAN-like domain 342 406 IPR003609 -
Stsc151041g00048 783 PIRSF SRK 1 440 IPR024171 GO:0004674
Stsc151041g00048 783 PIRSF SRK 426 783 IPR024171 GO:0004674
Stsc151041g00048 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 218 IPR036426 -
Stsc151041g00048 783 Pfam Protein tyrosine and serine/threonine kinase 467 732 IPR001245 GO:0004672|GO:0006468
Stsc151041g00048 783 CDD STKc_IRAK 471 737 - -
Stsc151041g00048 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 541 745 - -
Stsc151041g00048 783 ProSiteProfiles Protein kinase domain profile. 465 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00048 783 Gene3D - 18 150 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00048 Stsc-Chr151041 316203 319536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00048 438 783 Receptor kinase-like Gene Family AT4G11480 52.222 2.61e-114 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00048 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00048 - - ahf:112769711 1279.62