Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151041g00048 | ATGGAAAGGCTCACCTTGCTTCTGTTGTGCTTCTTATGGCTGCATGATATAGCAGTTTCCACTACCATAGAAAGCATTAGTACTACACAGTCCCTCACTGATGGTGACACCATGGTTTCAGATGATGGAACCTTTGCAGTTGGATTCTTTAGTATCCCAGAAAGTTCCATGAACCGTTACCTCGGAATATGGTACAACAAAGTGCCATCTATGACAGTAGTATGGATTGCCAATAGAAACACTCCGCTTAATGACTCATCCGGGGTCTTGAAGATCACTGGCAGCGGAACTCTTGCTCTTTATAGTCATAACCATACCATCATTTGGTATTCCAACCCATCAAGATTCGCACAGCAACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAAGATGGGAGCAATGATGATGATCCAAAGAGTTATCTTTGGCAGAGTTTTGATTACCCTTATGACACACTACTGCCAGGGATGAAACTGGGAATTGACTTAAGTACAGGCCTTCAAAGGTACCTAACATCACCGGTTAGCCCTGATGATCCTTCTGAAGGTAACTATACCCTTCAGCTTGATATTGCTGGATATCCACAATTTTGTATAAGAAATGGCCAATTAGCTATATATTGTAGTGGACCTTGGAACGGTCTTCGGTTTGACGGAATTCCCCAGTTAAAACTTAATTCTATATACAACTATGACTTTGTTTACAACAAGGAAGAGATATATTACGCATTTGAGCTTTATAATAGCTCGGTATATTCAAGGTTTGTGCAAAATTCATACGGATCAATGGTTCGTTATGTGTGGAGTGTTAACAATAAGAGTTGGTCTGTCTATCTAACATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGCAGCTGTGATGTATCCAATTCCCCTGTGTGTAGTTGCCTATTGAAAGGATTTGAACCTAAAGTCCCTGAAGAATGGAATCAGACAGATTGGTCTAATGGTTGTGTTAGAATCAATAACTTGAGTTGCCAGGGTGATGGATTTGTGAAGTTGCCTGGTTTGAAGTTACCAAACACAGAAAGGGCATCATGGTTGAACAATAGCATGAGTCTTGATGAGTGTGCTAATTTATGTATGAAGAATTGTTCCTGCATAGCTTATGCTGCCTTTGATATCAGGGGAAGTGGGTGTTTATTCTGGTATGGTGAGCTGATAGATATTAGAGTGCTGAGTAGTCCACAGCAAGATCTTTATGTCAGAATGTCAAAGAAAGATATAGGAAACATGTCGACAAACAACCCAGAAAGATATGCACATGCATTACAAGAGCATGCGGAAGAAGAACTTGATCTACCATTGTTTGATATGGCTACACTTATTGTTGCAACCAATAACTTCTCCACCAATAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAAAGATGGAAGAGAAATAGCTGTTAAGAGGCTCTCAAAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTAATGCATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGATGTTGCATTCAAGAAGAAGAAAGGATTCTGGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAAAGAGAGAAGCAAGCAACTACTTTGGCCTCAGCGTTTCCTTATTATCACTGGGATTGCACGGGGCCTTCTCTATCTCCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAGGCTAGCAATGTTCTGCTAGATGGCGAAATGAACGCCAAAATCTCTGATTTTGGACTAGCTAGAAGCTTTATCGGAAATGAAAATGAAGCAGCAAACACTACAACAGTTGTTGGAACTTATGGCTATCTATCACCAGAGTACCTAATTGATGGAATCTTCTCAACAAAGTCCGATGTCTATAGCTTTGGTGTGCTTGTATTAGAGATAATTAGTGGAAAAAGAAATAGAGGATACCATGATAAAAATAATCGCTTTAATCTTCTTGGGCATGTATGGACACTCTTCAAAGAAGACAATTGCTCAGAAATAGTTGATACGTCCATAAAAAATTCGTCCGATTTACCTGGAGTCATAAGAGCAATTCATGTGGGTCTACTCTGTGTTCAGCAGAATCCAGAAGACAGGCCAAGCATGTCGCATGCTCTTATGATGCTGAGTAGCGAATGGACACTGCCTCAACCAAAAATGCCAGGGTTCTTTACAGAGAGAGATCCTGTTGGTGACACTTCTTCGTCAAGCAATATTAAACATCTATCAGTTAACGGAATCACAGTTAGTATGGTGCATCCGCGGTAG | 2352 | 0.4005 | MERLTLLLLCFLWLHDIAVSTTIESISTTQSLTDGDTMVSDDGTFAVGFFSIPESSMNRYLGIWYNKVPSMTVVWIANRNTPLNDSSGVLKITGSGTLALYSHNHTIIWYSNPSRFAQQPVAVLLDSGNLIVKEDGSNDDDPKSYLWQSFDYPYDTLLPGMKLGIDLSTGLQRYLTSPVSPDDPSEGNYTLQLDIAGYPQFCIRNGQLAIYCSGPWNGLRFDGIPQLKLNSIYNYDFVYNKEEIYYAFELYNSSVYSRFVQNSYGSMVRYVWSVNNKSWSVYLTLPTDICDDYGKCGAYGSCDVSNSPVCSCLLKGFEPKVPEEWNQTDWSNGCVRINNLSCQGDGFVKLPGLKLPNTERASWLNNSMSLDECANLCMKNCSCIAYAAFDIRGSGCLFWYGELIDIRVLSSPQQDLYVRMSKKDIGNMSTNNPERYAHALQEHAEEELDLPLFDMATLIVATNNFSTNNILGKGGFGTVYQGMLKDGREIAVKRLSKDSRQGLQEFKSEVMHVVKLQHRNLVKLLGCCIQEEERILVYEFMPNKSLDYFIFDKERSKQLLWPQRFLIITGIARGLLYLHQDSRHRIVHRDLKASNVLLDGEMNAKISDFGLARSFIGNENEAANTTTVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIISGKRNRGYHDKNNRFNLLGHVWTLFKEDNCSEIVDTSIKNSSDLPGVIRAIHVGLLCVQQNPEDRPSMSHALMMLSSEWTLPQPKMPGFFTERDPVGDTSSSSNIKHLSVNGITVSMVHPR | 783 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151041g00048 | 783 | SMART | blect_4 | 29 | 153 | IPR001480 | - | |
Stsc151041g00048 | 783 | ProSiteProfiles | Bulb-type lectin domain profile. | 23 | 145 | IPR001480 | - | |
Stsc151041g00048 | 783 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 18 | 150 | - | - | |
Stsc151041g00048 | 783 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 10 | 728 | - | - | |
Stsc151041g00048 | 783 | Gene3D | Transferase(Phosphotransferase) domain 1 | 541 | 743 | - | - | |
Stsc151041g00048 | 783 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 429 | 540 | - | - | |
Stsc151041g00048 | 783 | Gene3D | Phosphorylase Kinase; domain 1 | 426 | 540 | - | - | |
Stsc151041g00048 | 783 | SMART | ntp_6 | 342 | 420 | IPR003609 | - | |
Stsc151041g00048 | 783 | CDD | PAN_AP_plant | 339 | 419 | - | - | |
Stsc151041g00048 | 783 | SMART | serkin_6 | 465 | 742 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151041g00048 | 783 | ProSitePatterns | Protein kinases ATP-binding region signature. | 471 | 493 | IPR017441 | GO:0005524 | |
Stsc151041g00048 | 783 | ProSiteProfiles | PAN/Apple domain profile. | 342 | 421 | IPR003609 | - | |
Stsc151041g00048 | 783 | SUPERFAMILY | Protein kinase-like (PK-like) | 449 | 765 | IPR011009 | - | |
Stsc151041g00048 | 783 | Gene3D | Hepatocyte Growth Factor | 339 | 419 | - | - | |
Stsc151041g00048 | 783 | CDD | B_lectin | 29 | 153 | IPR001480 | - | |
Stsc151041g00048 | 783 | Pfam | D-mannose binding lectin | 72 | 177 | IPR001480 | - | |
Stsc151041g00048 | 783 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 586 | 598 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc151041g00048 | 783 | Pfam | S-locus glycoprotein domain | 211 | 320 | IPR000858 | GO:0048544 | |
Stsc151041g00048 | 783 | Pfam | Domain of unknown function (DUF3403) | 738 | 783 | IPR021820 | GO:0004674 | |
Stsc151041g00048 | 783 | Pfam | PAN-like domain | 342 | 406 | IPR003609 | - | |
Stsc151041g00048 | 783 | PIRSF | SRK | 1 | 440 | IPR024171 | GO:0004674 | |
Stsc151041g00048 | 783 | PIRSF | SRK | 426 | 783 | IPR024171 | GO:0004674 | |
Stsc151041g00048 | 783 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 72 | 218 | IPR036426 | - | |
Stsc151041g00048 | 783 | Pfam | Protein tyrosine and serine/threonine kinase | 467 | 732 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc151041g00048 | 783 | CDD | STKc_IRAK | 471 | 737 | - | - | |
Stsc151041g00048 | 783 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 541 | 745 | - | - | |
Stsc151041g00048 | 783 | ProSiteProfiles | Protein kinase domain profile. | 465 | 742 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc151041g00048 | 783 | Gene3D | - | 18 | 150 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151041g00048 | Stsc-Chr151041 | 316203 | 319536 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151041g00048 | 438 | 783 | Receptor kinase-like Gene Family | AT4G11480 | 52.222 | 2.61e-114 | 359 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc151041g00048 | PK_Tyr_Ser-Thr | 1.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151041g00048 | - | - | ahf:112769711 | 1279.62 |