Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00047 ATGGTGGCTTCAACTGCAAGCGACACCATTGATACACTGCAATCCATCAGTGATAACAAGGGTGACACCATGGTTTCATCTGATGAAACCTTTGCACTTGGATTCTTCAGCCCAAAAAATTCCACCAACCGTTACATCGGAATTTGGTACAACAAAGTCCCAATACAGACAGTGGTATGGGTTGCAAACAAGGACAACCCCCTCACTGACTCTTCAGGAGTCTTGAAAGTCAACGCCACCGGAATTCTCATCCTTGTTAACCGTAACAAGGAAGTAATCTGGTCCTCCAACACAACAACATCGGCGCAAGATCCGGTGGCAAAGCTTCTGGATTCTGGGAATCTTGTGGTGCAAGAAAGAAACAATAACAGAGCGGATGGCTTTTTATGGCAGAGTTTTGATTATCCATCAGACACACTTTTGCCTGGACAGAAGTTTGGAGTGAATCTAGTCACAGGACTGAACAGATTCTTGACATCTTGGAAGAGTTTGGATGACCCTTCGCACGGTAGCTATACTTATGGACTGGATATCCATGGGTACCCACAGTTATTTATAATGGATGGAAGTACCAAAAGATTTCGATTCGGATCATGGAATGGTGTTCAGGTTAGCGGGGTAGCTCAGTTGACAGAGAATCCAATATTCATATATGAGTTTAGTTATAGTCAGGAAGAAGCATATTTTATATATGAGCTAATCAATAGTTCAGTTCTTCATAGGCTTCGATTGACACCGGATGGATTTAGCCACCGTACTACTTGGAGCTATGAAAAAATGGAGTGGATCACTTTCTTCCACATTCCTGGGGATTACTGTGATTACTATTCACAATGTGGAGCTTATGCTAGCTGTAATGTAAACAGGTCTCCTAAGTGTAAATGCCTGGATAAATTTGTACAAAATGGGACAGGTTGTGTAAGGAGAACTTCCTTGAACTGCCATGAAGACGGGTTCTTGAGGTATCCGGGGCTAAAGTTACCGGACACGGATAAATCGTGGTTTGATAGAACAATTAGCCTTGATGATTGCAGGATTTTGTGCCTGAAGAATTGCTCATGTACAGCTTATGCTCCTTTGGATATCAGCAATGGTGCAAGGGGGTGTATACTTTGGTTTGAAGGTTTGATGGATTTGAAAGAGTTGAATTCATCTCTTCAAGATGTTTACATAAGGGTGGCAAAGACAGAGTTAGGTAGTATAGAAGTGCAGAATTCAAACAAATCCAACAGTAAGCACAAGCAAGATGCTATCATCATAAGCTCCACTTTGCTGTCTTTTGGGGCTTTAGTCTCCTGTTTAGCATTGATCTTTTATAAATGGAAGACAAGACAAATAACCAGAAATATGAGAAGAAATAAAGAAACACAAGCAAGTGGAACAAATGATGATCAGCATGAGGAAGACATAGATTTACCATTGTTTGACATTTCTGCAATTTCTTTGGCAACAAATAACTTTTCAACTGATAACATACTGGGAAAAGGTGGTTTTGGATTAGTTTATAAGGGTATCCTAGAAGATGGAAGAGAAATAGCTGTCAAAAGACGGTCAGAGAATTCAACCCAAGGACTCAAAGAATTTAAAAATGAAGTTAAGCATGTTTCCAAACTTCAACACAGGAATTTAGTGAAGCTACTAGGGTGCTGCATTCAAGCAACAGAGAGGCTTCTGATTTATGAATTTATGCCCAATAAGAGCTTGGACTTCTTCATATTTGATGAACAGAAGAGCAAGTTACTAAATTGGCCGACGCGTTTACATATAATCAATGGGATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAAGCCGCCAATATATTGTTAGATGCTGAGATGAACCCAAAGGTATCCGACTTTGGACTCGCTAGAAGCTTCGGAGGAAATGAGGTTGAAGCAAGCACACAAAATGTGGTTGGAACCTATGGATATCTATCACCGGAATACGTAATTGATGGAGTATACTCAACAAAATCTGATGTATTTAGCTTTGGTGTGTTGGTGTTGGAGATTGTGAGTGGGAAGAGAAACAGAGGCTTCAATCATCAAGATCACCACTTTAACCTTCTTGGTCATGCATGGAGATTGTTCACAGAAGGCAAAGGGTATGAAATAGTTTGTGATGCAATAAGAGACACATCAAATATATCTTCAGTGCTAAGATTGATTCATATAGGACTACTATGTGTGCAGCAAAACCCAGATGATAGACCAAGCATGTCAACTGTGGTTTTGATGTTGAGTAGTGAATCTTCATTGCCTCAGTCTAAAATGCCAGGATTCTTTACAGAGAGAGAGATGGGAGGTGATGGTTCTTCATCAAGTAGTTATAAAGCATTCTCAAATAATGATTATACAGTTAGTCTGTTGGAAGCTCGGTAG 2415 0.4004 MVASTASDTIDTLQSISDNKGDTMVSSDETFALGFFSPKNSTNRYIGIWYNKVPIQTVVWVANKDNPLTDSSGVLKVNATGILILVNRNKEVIWSSNTTTSAQDPVAKLLDSGNLVVQERNNNRADGFLWQSFDYPSDTLLPGQKFGVNLVTGLNRFLTSWKSLDDPSHGSYTYGLDIHGYPQLFIMDGSTKRFRFGSWNGVQVSGVAQLTENPIFIYEFSYSQEEAYFIYELINSSVLHRLRLTPDGFSHRTTWSYEKMEWITFFHIPGDYCDYYSQCGAYASCNVNRSPKCKCLDKFVQNGTGCVRRTSLNCHEDGFLRYPGLKLPDTDKSWFDRTISLDDCRILCLKNCSCTAYAPLDISNGARGCILWFEGLMDLKELNSSLQDVYIRVAKTELGSIEVQNSNKSNSKHKQDAIIISSTLLSFGALVSCLALIFYKWKTRQITRNMRRNKETQASGTNDDQHEEDIDLPLFDISAISLATNNFSTDNILGKGGFGLVYKGILEDGREIAVKRRSENSTQGLKEFKNEVKHVSKLQHRNLVKLLGCCIQATERLLIYEFMPNKSLDFFIFDEQKSKLLNWPTRLHIINGIARGLLYLHQDSRHRIVHRDLKAANILLDAEMNPKVSDFGLARSFGGNEVEASTQNVVGTYGYLSPEYVIDGVYSTKSDVFSFGVLVLEIVSGKRNRGFNHQDHHFNLLGHAWRLFTEGKGYEIVCDAIRDTSNISSVLRLIHIGLLCVQQNPDDRPSMSTVVLMLSSESSLPQSKMPGFFTEREMGGDGSSSSSYKAFSNNDYTVSLLEAR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00047 804 CDD STKc_IRAK 493 758 - -
Stsc151041g00047 804 CDD B_lectin 21 136 IPR001480 -
Stsc151041g00047 804 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Stsc151041g00047 804 Pfam S-locus glycoprotein domain 194 301 IPR000858 GO:0048544
Stsc151041g00047 804 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00047 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 766 - -
Stsc151041g00047 804 Pfam D-mannose binding lectin 57 162 IPR001480 -
Stsc151041g00047 804 Gene3D Phosphorylase Kinase; domain 1 461 562 - -
Stsc151041g00047 804 CDD PAN_AP_plant 310 394 - -
Stsc151041g00047 804 SMART ntp_6 314 393 IPR003609 -
Stsc151041g00047 804 Pfam PAN-like domain 314 379 IPR003609 -
Stsc151041g00047 804 Gene3D Transferase(Phosphotransferase) domain 1 563 769 - -
Stsc151041g00047 804 SMART serkin_6 487 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00047 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 133 - -
Stsc151041g00047 804 Pfam Domain of unknown function (DUF3403) 759 804 IPR021820 GO:0004674
Stsc151041g00047 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Stsc151041g00047 804 SMART blect_4 15 136 IPR001480 -
Stsc151041g00047 804 ProSiteProfiles Bulb-type lectin domain profile. 9 130 IPR001480 -
Stsc151041g00047 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 167 IPR036426 -
Stsc151041g00047 804 ProSiteProfiles PAN/Apple domain profile. 314 394 IPR003609 -
Stsc151041g00047 804 Pfam Protein tyrosine and serine/threonine kinase 489 756 IPR001245 GO:0004672|GO:0006468
Stsc151041g00047 804 Gene3D Hepatocyte Growth Factor 309 392 - -
Stsc151041g00047 804 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 749 - -
Stsc151041g00047 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 450 562 - -
Stsc151041g00047 804 SUPERFAMILY Protein kinase-like (PK-like) 470 758 IPR011009 -
Stsc151041g00047 804 Gene3D - 2 133 IPR036426 -
Stsc151041g00047 804 PIRSF SRK 1 804 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00047 Stsc-Chr151041 311337 314481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00047 405 788 Receptor kinase-like Gene Family AT4G23190 47.315 5.42e-114 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00047 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00047 - - adu:107462372 1489.55