Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00046 ATGAACTGCATGGTTGCTTTCACTGCAAGGGACACCATTCATTCAATGCAATCCATCAGTGATGGTGACACAATAGTTTCAGCAGATGAAACTTTTGCATTGGGATTCTTTAGCCCTGGAACTTCCAAGAACCGTTACCTCGGAATCTGGTTTAACAAAGATCCAGCAAAGACAGTAGCATGGGTTGCAAACAGAGAAAAACCCCTCACTCACTCTTCAGGGGTTTTGATGCTCAACGACACCGGAATTCTACTCCTTCTTGATCATAACAACAGTCTTATTTGGTCCTCCAACACAACAAGATCCCTCCTGAATCCGATCGCAAAGCTTTCGAATTCAGGGAATCTTGTTGTGCAAGAAAGCAGCAACAGTGTTGCTACCAAAGAAGATTTTGTTTGGCAAAGTTTTGATTATCCATGTGACACTCTCTTGCCTGGACAGAAGTTAGGAAGGAATCTAAAAACAGGACAGAATCGATTTCTAACCTCGTGGAACAGCTCGGATGATCCGTTTCCGGGTAGTTATACTTTAGAATTCAATGTCAACGGTTATCCTCAATTAGTCCTTAAAGAAGGCACATCCATAAGATTTCGTGCCGGATCATGGAATGGAGATCAATTCAGTGGAACGCCTCAATTGAAAGGAAACTCTGGCTTTAGATATATATTTGTTTCCAATGAGGAAGAGATATATTTCATGTATGAGCTTATCAATAGTTCAATACCACATAGAGTTTTTCTAACGCCGGAGGGAATCAACGAGCGAAGCGAGTGGAATACAGACACAATGAGTTGGACTAACTTGGCGAAGCTACCGGCGGACGATTGTGACTACTATGAAACATGTGGAGCCTATTCTAGCTGTAACATAAACAACTATCCAATGTGTAGTTGTTTGGAGGGATTTGTGCAAGATAATGATAATAAGAAGAAGCAGCAAGGTTTATCAGATGGTTGTGTAAGGAGAACTTCATTGGATTGTTATGGAGATGGGTTTTTGAAGTACTCAGGGCTGAAATTTCCAGATACAGAAAGATCATGGTTTAGTAGGAATATGAGCATTGAAGATTGTAAGATGCTGTGCTTGAAGAATTGTTCATGTATGGCGTATGCAGCTTTGGATATAAGTGAAGGTGGAAGTGGTTGTTTGATGTGGTTTGGTGATTTAAATGATATTAAAGATTTGAGTCCAGATTCTCTTCAAGATATTTACATAAGAATGGCTGCTACAGAACTAGCCTTCATCGTCTTTAGATGGAAGATGCTAAGAAAAGGTGTAATATGTGACCAACATGAGGAAGATCTACAATTGCCTTTGTTTGATATGTCCACAATTTCTTCTGCAACAAATAATTTTTCAACTGATAACATTCTGGGAAAAGGTGGCTTTGGTCCGGTATATAAGGGTGTCTTAAAGGACGGAAAAGAAATCGCGGTTAAGAGACTGTTACAGACTTCAAGCCAAGGAATCCAAGAGTTCAAAAACGAAGTCATGCATATTGCCAAACTTCAACATAGGAATTTGGTGAAACTCCTAGGATGTTCCATTTATGCAGAAGAAAGATTGCTTGTTTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAAAAGAAGGGCATGCTATTGGACTGGCCAGCGCGTTTGCACATTATCAATGGAATTGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAATTCATAGAGATCTCAAAGCTGCTAACGTATTGTTAGATGACGAAATGAACCCGAAAATCTCGGACTTCGGATTGGCTAGAAGCTTTGGTGGGAATGAAGCTGAAGCAAATACTCAGCATGTGGTTGGAACCTATGGATATCTGTCACCAGAATATGTGATTGATGGAGTGTATTCAACAAAATCTGATGTATTTAGCTTTGGTGTATTGGTGCTGGAGATTGTGAGTGGAAAGAGAAATCAAGGATTCAATCATCAAGATCATCATTTTAATCTTCTTGGACATGCGTGGAGATTGTTCATGGAAGGCAAAGGCTATGAATTAATTTGTGGAGCAATTAAAGACACATCAAATTTATTTGCAGTAGTGAGATCAATTAATGTAGGGCTACTATGTGTGCAACAAAATCCAGATGATAGACCAAGCATGTCAACAGTGGTGTTAATGTTGAGTAGTGAGTCTGCATTGCCTCAACCTAAAATGCCAGGATTCTTTACAGAGAGAGAGATGGGAGGTGATGCTTCTTCATCAAGTAGTTATAAGTTATTCTCAAATAATGATTTTACAGACAGCTTTTTGGAAGCAAGATAG 2310 0.3931 MNCMVAFTARDTIHSMQSISDGDTIVSADETFALGFFSPGTSKNRYLGIWFNKDPAKTVAWVANREKPLTHSSGVLMLNDTGILLLLDHNNSLIWSSNTTRSLLNPIAKLSNSGNLVVQESSNSVATKEDFVWQSFDYPCDTLLPGQKLGRNLKTGQNRFLTSWNSSDDPFPGSYTLEFNVNGYPQLVLKEGTSIRFRAGSWNGDQFSGTPQLKGNSGFRYIFVSNEEEIYFMYELINSSIPHRVFLTPEGINERSEWNTDTMSWTNLAKLPADDCDYYETCGAYSSCNINNYPMCSCLEGFVQDNDNKKKQQGLSDGCVRRTSLDCYGDGFLKYSGLKFPDTERSWFSRNMSIEDCKMLCLKNCSCMAYAALDISEGGSGCLMWFGDLNDIKDLSPDSLQDIYIRMAATELAFIVFRWKMLRKGVICDQHEEDLQLPLFDMSTISSATNNFSTDNILGKGGFGPVYKGVLKDGKEIAVKRLLQTSSQGIQEFKNEVMHIAKLQHRNLVKLLGCSIYAEERLLVYEFMPNKSLDYFIFDEKKGMLLDWPARLHIINGIARGLLYLHQDSRHRIIHRDLKAANVLLDDEMNPKISDFGLARSFGGNEAEANTQHVVGTYGYLSPEYVIDGVYSTKSDVFSFGVLVLEIVSGKRNQGFNHQDHHFNLLGHAWRLFMEGKGYELICGAIKDTSNLFAVVRSINVGLLCVQQNPDDRPSMSTVVLMLSSESALPQPKMPGFFTEREMGGDASSSSSYKLFSNNDFTDSFLEAR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00046 769 Gene3D - 5 136 IPR036426 -
Stsc151041g00046 769 PIRSF SRK 417 769 IPR024171 GO:0004674
Stsc151041g00046 769 PIRSF SRK 1 428 IPR024171 GO:0004674
Stsc151041g00046 769 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 420 527 - -
Stsc151041g00046 769 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 5 136 - -
Stsc151041g00046 769 ProSiteProfiles Bulb-type lectin domain profile. 10 131 IPR001480 -
Stsc151041g00046 769 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 714 - -
Stsc151041g00046 769 ProSiteProfiles PAN/Apple domain profile. 327 408 IPR003609 -
Stsc151041g00046 769 SMART blect_4 16 139 IPR001480 -
Stsc151041g00046 769 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 170 IPR036426 -
Stsc151041g00046 769 SMART serkin_6 452 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00046 769 CDD STKc_IRAK 458 723 - -
Stsc151041g00046 769 Gene3D Hepatocyte Growth Factor 326 408 - -
Stsc151041g00046 769 Pfam PAN-like domain 328 392 IPR003609 -
Stsc151041g00046 769 Gene3D Phosphorylase Kinase; domain 1 420 527 - -
Stsc151041g00046 769 Pfam D-mannose binding lectin 58 164 IPR001480 -
Stsc151041g00046 769 SMART ntp_6 327 407 IPR003609 -
Stsc151041g00046 769 Gene3D Transferase(Phosphotransferase) domain 1 528 732 - -
Stsc151041g00046 769 ProSiteProfiles Protein kinase domain profile. 452 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00046 769 Pfam Domain of unknown function (DUF3403) 724 769 IPR021820 GO:0004674
Stsc151041g00046 769 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 528 731 - -
Stsc151041g00046 769 SUPERFAMILY Protein kinase-like (PK-like) 435 738 IPR011009 -
Stsc151041g00046 769 Pfam S-locus glycoprotein domain 197 304 IPR000858 GO:0048544
Stsc151041g00046 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Stsc151041g00046 769 CDD PAN_AP_plant 323 408 - -
Stsc151041g00046 769 Pfam Protein tyrosine and serine/threonine kinase 454 720 IPR001245 GO:0004672|GO:0006468
Stsc151041g00046 769 CDD B_lectin 16 139 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00046 Stsc-Chr151041 302141 310049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00046 440 751 Receptor kinase-like Gene Family AT4G23290 57.099 2.25e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00046 PK_Tyr_Ser-Thr 7.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00046 - - ahf:112705340 968.378