Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00045 ATGATTACTCATTTATTATTCTCTCTTAGTGGTTTCTCAAGCGCAACAGATTCAATATCAAAGGTTCAGCCTCTTCATGAAGGGAAAACCTTGGTTTCTAATGATGGAACCTTTGAAATGGGGTTTTTCAGCCCAGGAAGTTCTTCAAACCATTACTTAGGTATATGGTACAAGAATATCTCAATAAGAACCGTTGTTTGGGTTGCAAATAGATCCAACCCTGTTAAAGACAACACCACCAACCTCCACATTAACAACCAAGGTATTCTTCAAATTGTTAACAAGAACGGAACCGTCTTTTGGTCTTCAAACTCCACCACAGAGGACAATCTTCTGATGAATCCAGTTGCTCAGCTCTTAGATTCTGGGAATCTTGTTGTAAGAGACGAGAACGACCAAGATTCTGTGAACTACGTTTGGCAAAGCTTTGATTACCCTTGTGATACGCTCTTACCGGGAATGAAGCTCGGTTGGGATCTTAAAACCGGTCTTCAACGGCGTTTAACTGCTTGGAGGAATTGGGACGATCCGTCGCCGGGGAATCTTTCTTGGGGAATCTCGCTTGACGGTTTTCCCCAAGGAGTATTCTTGAAGGGGTCTAGAGAGTATTATCGTGTGGGTCCATGGATTGGTCCTCGATTCAGCGGAACACCTGAATTGAAGACCAATCAACTTTTTAGTTATAAATTTGTGTCGGATAAAAATGAAGTGTATTTTGAATACATCCTAAAAAATAAGTTAATTTTACTGAGACTGGTGATGAACGAAACCTCAGGTACTAGGCATGGGTACATGTGGAGCATTGGATCCCATGAGTGGATGGATTTTTCTTCTCATTCTCCGAGAGATCAAGACTGTGATCTGTACAATCACTGCGGTCCAAATGCGATTTGCAGCGTGATAAGCGGGAATGAAACATGCAAGTGTTTGAAGGGGTTCAAGCAAAAATCATCACAAGACTGGAGTCAAGGATGTTCATCATTGGTTGATGAGAAATTGAGGTGCAACATGGATAATAAGACGCGTACTAATAATGGTGGGTTAACGTTTTATAAAGTTGGAGGAATGAAATATCCTGATACTCGGAGTTCATGGGTGAATGAGAGTATGAATCTGAGTGAATGCAGAGATAAATGCATGGAGAATTGTTCGTGTATGGCATACGCAAGCTCAGACATTAGCGAAGGTGGTAGTGGCTGTTTGATGTGGTTCGGTGATCTTAATGATATCAAAGAATTTTCTGACGGTGGCGCTGATATATACATTCGAACCATGATCGATGGGAAAGAAGATCACAAGAAGAAGGCAGCAGTGATAGTCATCAGCGGTACCATTGCCTCGGCTTTGGTCATGATTTTGGTATTTTGTTACATCGGCAAGAGAATAATAAGCAGCAAAGTTAAGAAGAATAATGATTATGCTCATGAAGACTACTTGGATCTTCCTATCTTTGACCTTGCTACAATTGTAAAAGCAACTCAAGACTTTTCCATTAGTAATAAACTTGGAAAAGGTGGATTTGGGACTGTGTATAAGGGAACTCTAGTAGATGGACAAGATATTGCTGTGAAGAGACTTTCACATGGTTCTAGTTCTGGACAAGGGTTGACAGAATTTATGAATGAAGTTTTATTAATTGCTAAACTTCAACATCGCAATTTAGTTAAGCTTCTTGGTTGTTGTATTCAAGAAGGAGAAAAGATGCTTGTCTATGAATACATGCCCAATAAAAGCCTAGACAACTTTATCTTTGGTCGCAAAGATGACACAATTATTTTAGACTGGTCTCACCGTTTCAACATTATAAATGGTGTTGCTCGAGGATTACTTTATCTTCATCAAGATTCTCGATTAAGGATTATACATAGAGATTTGAAAGCTAGTAATGTGTTACTTGATATCGAGTTAAACCCTAAAATTTCTGATTTTGGGATGGCAAAGTCTTTTGGAGGAAATCAAATTGAAGGAAATACAAATAGAATTGTCGGAACATACGGTTACATGGCTCCTGAATATGCTATTTACGGATCATTCTCAATAAAATCCGATGTATTTAGCTTTGGAGTATTAGTTTTGGAGATAATAAGTGGGAAAAAGAATAGAATGATTTATCGTGAAGGTATAAGTACAAATCTTATTGGACAAGCTTGGACATTATGGAAAGAAAAGAAGGTTCTAGAGTTAATCGATTCATGCATGGAGGATTCATATGATGAATCAGAAGCATTGCGTTGCATCCAGATCGGTCTTCTATGTGTGCAACAACATCCCGAGGATAGACCAAGTATGTCAAATGTGGTTATGATGTTGGGGAGTGAGGTTGCATTGCCTCAACCTAAGGAGCCTTCTTTCCTCACTGAGACTTCTATTCTTCAAGTGGTTTCTTCTGCCAACCAACAATCTATTATTTCAGCTAATGAAATAAGTGTTACAGAATTAGAACCTCGATAG 2451 0.39 MITHLLFSLSGFSSATDSISKVQPLHEGKTLVSNDGTFEMGFFSPGSSSNHYLGIWYKNISIRTVVWVANRSNPVKDNTTNLHINNQGILQIVNKNGTVFWSSNSTTEDNLLMNPVAQLLDSGNLVVRDENDQDSVNYVWQSFDYPCDTLLPGMKLGWDLKTGLQRRLTAWRNWDDPSPGNLSWGISLDGFPQGVFLKGSREYYRVGPWIGPRFSGTPELKTNQLFSYKFVSDKNEVYFEYILKNKLILLRLVMNETSGTRHGYMWSIGSHEWMDFSSHSPRDQDCDLYNHCGPNAICSVISGNETCKCLKGFKQKSSQDWSQGCSSLVDEKLRCNMDNKTRTNNGGLTFYKVGGMKYPDTRSSWVNESMNLSECRDKCMENCSCMAYASSDISEGGSGCLMWFGDLNDIKEFSDGGADIYIRTMIDGKEDHKKKAAVIVISGTIASALVMILVFCYIGKRIISSKVKKNNDYAHEDYLDLPIFDLATIVKATQDFSISNKLGKGGFGTVYKGTLVDGQDIAVKRLSHGSSSGQGLTEFMNEVLLIAKLQHRNLVKLLGCCIQEGEKMLVYEYMPNKSLDNFIFGRKDDTIILDWSHRFNIINGVARGLLYLHQDSRLRIIHRDLKASNVLLDIELNPKISDFGMAKSFGGNQIEGNTNRIVGTYGYMAPEYAIYGSFSIKSDVFSFGVLVLEIISGKKNRMIYREGISTNLIGQAWTLWKEKKVLELIDSCMEDSYDESEALRCIQIGLLCVQQHPEDRPSMSNVVMMLGSEVALPQPKEPSFLTETSILQVVSSANQQSIISANEISVTELEPR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00045 816 CDD STKc_IRAK 502 770 - -
Stsc151041g00045 816 Pfam PAN-like domain 347 410 IPR003609 -
Stsc151041g00045 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Stsc151041g00045 816 Gene3D Transferase(Phosphotransferase) domain 1 574 779 - -
Stsc151041g00045 816 SMART blect_4 22 146 IPR001480 -
Stsc151041g00045 816 ProSiteProfiles Bulb-type lectin domain profile. 16 140 IPR001480 -
Stsc151041g00045 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 177 IPR036426 -
Stsc151041g00045 816 Gene3D Phosphorylase Kinase; domain 1 422 573 - -
Stsc151041g00045 816 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Stsc151041g00045 816 Pfam D-mannose binding lectin 64 172 IPR001480 -
Stsc151041g00045 816 SMART serkin_6 496 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00045 816 ProSiteProfiles PAN/Apple domain profile. 335 425 IPR003609 -
Stsc151041g00045 816 SUPERFAMILY Protein kinase-like (PK-like) 471 773 IPR011009 -
Stsc151041g00045 816 Pfam Domain of unknown function (DUF3403) 773 816 IPR021820 GO:0004674
Stsc151041g00045 816 Gene3D Hepatocyte Growth Factor 340 420 - -
Stsc151041g00045 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 11 143 - -
Stsc151041g00045 816 Pfam S-locus glycoprotein domain 204 316 IPR000858 GO:0048544
Stsc151041g00045 816 CDD B_lectin 22 146 IPR001480 -
Stsc151041g00045 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 778 - -
Stsc151041g00045 816 CDD PAN_AP_plant 342 424 - -
Stsc151041g00045 816 Gene3D - 11 143 IPR036426 -
Stsc151041g00045 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 573 - -
Stsc151041g00045 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Stsc151041g00045 816 Pfam Protein tyrosine and serine/threonine kinase 498 770 IPR001245 GO:0004672|GO:0006468
Stsc151041g00045 816 ProSiteProfiles Protein kinase domain profile. 496 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00045 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 761 - -
Stsc151041g00045 816 SMART ntp_6 345 424 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00045 Stsc-Chr151041 295158 299451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00045 431 799 Receptor kinase-like Gene Family AT4G23190 50.396 2.12e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00045 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00045 - - cave:132173746 907.901