Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00044 ATGGCTGCACAAAACTCATCACAGACTCATCAATTCCAGGATTACCTGCCCTTCATGGCCAACAAGCTTGGTGGGGATGGCCTAATTGATGAGCTATGCAATGGTTTCAATCTCCTCAAGGATTCAGATAAAGGGGTTATAACATTTGAGAGCCTCAAGAGGAATTCAGCTTTGCTTGGCCTTCAAGGGTTGTCTGATGAGGACCTCAGGTCAATGGTCTTGGAAGGTGACTTTGATGGTGATGGTGCTCTCAACCAGATGGAGTTCTGTGTCTTGATGTTCAGATTGAGCCCTGAACTCATGGAAGGCTCAAAGTTGTGGTTGGACCATGACTATCAGAGTTTGAAGAAGAACCATCTTCCATTACTGTTGCTTCTTCTCACTGAGATTCTCTTGTTCTCTCAGCATGTCTCAAGTGAAACTGACTCAATTTCCATGTCTCAGCAACTTCCTGAAGGGAAAACCTTGGTTTCACAAGGTGGAAGCTTTGAATTGGGTTTCTTCATCCCAGGAAGTTCTGAAAACCGTTACTTGGGGATATGGTACCATAATATTCCAGTAAGAACAGTTGTTTGGGTTGCAAATAGAGCCAACCCTGTCAAAGAAAAATCTAGCATGCTGCATATAAACAATGAGGGAAATCTTGATCTAGTTAACCAGAATGGCAGTGTAATTTGGTCAGCAAATTCAACAAAGAAGGTTCAGAAGCCAATTCTCCAGCTCTTAGATTCCGGGAACCTTGTTCTGAGAGATGAGAATGACCAAGATCCTGAAAAGTTTCTATGGCAAAGCTTTGATTACCCTTGTGATACACTCTTGCCAGGAATGAAGCTTGGATGGGACCTTAAAACCGGTCTAGAGAGGCGTGTCACTGCTTGGAAGAATTGGGATGATCCATCAGCAGGTGACTTTTCTTGGGGTATCTCAATTGAAGGTGTTCCTCAAGTTATGATGTGGAAAGGTTCTGATGAATTCTACCGTGGAGGTCCATGGATTGGTCCTGGATTCAGTGGTGCACCGGAGTTGAAGACTAATCCGCTTTTCGGGTTCGAGTTTGTCTCCAATGAAGATGAAGTCTACTACTCATATAATCTCACAAACAAGTCAATGATTTCAAGGGTTGTTATGAACCAAACAATGGTTACTCGGCAGAGATACATTTGGATTGAAGAAGCCAAATCTTGGAGGCTATATGCTTCTGTGCCTAGAGATAACTGTGATTCTTATAGTCTCTGTGGTCCTAATGCAAATTGTGTCATAGGTGATTCACCAGTGTGCCAGTGTTTGACAGGTTTTGAGCCTAAATCTCAGCAGAGTTGGGACATGATGGATTGGACTCAAGGATGCATGCTCACTGAGAAATTGAGCTGTAATGATACCAGCAAAGATGGGTTTAAGCAATTCAGTGGATTGAAGTATCCTGATACTTCACATTCTTGGATCAATGTGAGTATGAATCTCAACCAATGCAGGGAAGAATGCTTGAAGAACTGTTCCTGTAAAGCATATGCGAATTCGGATGTTAGAGGAGGAGGTAGTGGCTGTTTGATGTGGTTCAGTGAGCTCCAAGATATCAGACAGTTTTCTGGCGGCGGCGGTCAAGATGTTTACATTCGAATGAAAATCTCGGCGATAAGTGGGAAAGGGCATAACATGAAGATTGCAGTGATATTCATAATCCTTGGCTCTGTACTTGTGGTGTCTCTGGTTTTATACTTTATTGGCAAGAGAATCTTAAACATCAGAGCTAAGTACACAAAGAAGAATTTTTCATTGGTGGAGAGACATGATGATGAAGGTGATAAAGAAGATCTAGAGCTTCCAATCTTTGATCTTGCTACAATTGTCAAAGCAACTGGTGACTTCTCATTCAGCAATAAACTTGGAGAAGGTGGATTTGGTTCTGTATACATGAGACTCTCACAGAGTTCTGGACAAGGATTGAATGAATTTAAGAATGAAGTGATATTAATCGCCAAACTTCAACATCGAAACCTTGTTAAGCTTCTTGGATGCTGTATTCAAGGAGAGGAGAAGATGCTTGTATATGAATACATGCCTAATAAAAGCCTAGACTCTTTTATCTTTGATCATGCCAAGAGTAAAGTTCTAGATTGGTCTAAGCGCTTCAACATCATTTGTGGAGTTGCGCGAGGACTTCTTTACCTTCATCAGGATTCAAGGTTGAGGATAATACATAGAGATCTTAAAGCAAGCAATGTGTTACTTGACAGCGAGTTGAATCCTAAGATATCTGATTTCGGTATGGCAAAAACTTTTGGTGGAGATCAAACAGAAGGAAATACGAATAGGGTGGTTGGAACATACGGCTACATGGCACCTGAATATGCAATTCATGGACTATTTTCTGTCAAATCCGACGTCTTCAGCTTTGGCGTATTACTATTGGAGATAGTGAGTGGAAAGAAGAACAGAGGATTTTCCCAATCAAAGAACTATATAAACCTTATTGGACATGCATGGATACTGTGGAAAGAAAACAGGCCACTAGAGTTGATTGATCCTTGCATGGAGAATTCATGTGATGTATCAGAAGCATTGCGTTGCATCCACATAAGTCTTCTATGTGTTCAACAGAACCCAGATGATAGGCCAACAATGTCAAATGTGGTTGTGATGTTGGGAAGTGAGGGTCCCTTGCCCCAACCTAAGGAGCCTGCTTTCCTCACTGAGAAGTACTCTTTTGAAGCAGACTCTTGTAGCAAACAAATATCTTCTTCTACCAATGAAATAAGCGTTACTATGTTAGAGCCTCGTTAG 2781 0.4157 MAAQNSSQTHQFQDYLPFMANKLGGDGLIDELCNGFNLLKDSDKGVITFESLKRNSALLGLQGLSDEDLRSMVLEGDFDGDGALNQMEFCVLMFRLSPELMEGSKLWLDHDYQSLKKNHLPLLLLLLTEILLFSQHVSSETDSISMSQQLPEGKTLVSQGGSFELGFFIPGSSENRYLGIWYHNIPVRTVVWVANRANPVKEKSSMLHINNEGNLDLVNQNGSVIWSANSTKKVQKPILQLLDSGNLVLRDENDQDPEKFLWQSFDYPCDTLLPGMKLGWDLKTGLERRVTAWKNWDDPSAGDFSWGISIEGVPQVMMWKGSDEFYRGGPWIGPGFSGAPELKTNPLFGFEFVSNEDEVYYSYNLTNKSMISRVVMNQTMVTRQRYIWIEEAKSWRLYASVPRDNCDSYSLCGPNANCVIGDSPVCQCLTGFEPKSQQSWDMMDWTQGCMLTEKLSCNDTSKDGFKQFSGLKYPDTSHSWINVSMNLNQCREECLKNCSCKAYANSDVRGGGSGCLMWFSELQDIRQFSGGGGQDVYIRMKISAISGKGHNMKIAVIFIILGSVLVVSLVLYFIGKRILNIRAKYTKKNFSLVERHDDEGDKEDLELPIFDLATIVKATGDFSFSNKLGEGGFGSVYMRLSQSSGQGLNEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLVYEYMPNKSLDSFIFDHAKSKVLDWSKRFNIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDSELNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNRGFSQSKNYINLIGHAWILWKENRPLELIDPCMENSCDVSEALRCIHISLLCVQQNPDDRPTMSNVVVMLGSEGPLPQPKEPAFLTEKYSFEADSCSKQISSSTNEISVTMLEPR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00044 926 ProSiteProfiles EGF-like domain profile. 402 438 IPR000742 -
Stsc151041g00044 926 Pfam D-mannose binding lectin 189 294 IPR001480 -
Stsc151041g00044 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Stsc151041g00044 926 SMART serkin_6 622 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00044 926 Pfam PAN-like domain 457 525 IPR003609 -
Stsc151041g00044 926 PIRSF SRK 114 926 IPR024171 GO:0004674
Stsc151041g00044 926 Gene3D Transferase(Phosphotransferase) domain 1 686 885 - -
Stsc151041g00044 926 ProSiteProfiles PAN/Apple domain profile. 457 541 IPR003609 -
Stsc151041g00044 926 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 127 872 - -
Stsc151041g00044 926 Gene3D - 9 120 - -
Stsc151041g00044 926 SMART blect_4 147 268 IPR001480 -
Stsc151041g00044 926 SUPERFAMILY EF-hand 4 93 IPR011992 -
Stsc151041g00044 926 Pfam EF-hand domain pair 44 95 IPR002048 GO:0005509
Stsc151041g00044 926 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00044 926 SMART ntp_6 460 540 IPR003609 -
Stsc151041g00044 926 CDD B_lectin 150 268 IPR001480 -
Stsc151041g00044 926 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 136 265 - -
Stsc151041g00044 926 SUPERFAMILY Protein kinase-like (PK-like) 605 896 IPR011009 -
Stsc151041g00044 926 ProSiteProfiles Bulb-type lectin domain profile. 141 262 IPR001480 -
Stsc151041g00044 926 CDD PAN_AP_plant 454 539 - -
Stsc151041g00044 926 Pfam Protein tyrosine and serine/threonine kinase 642 880 IPR001245 GO:0004672|GO:0006468
Stsc151041g00044 926 CDD STKc_IRAK 628 881 - -
Stsc151041g00044 926 Pfam Domain of unknown function (DUF3403) 884 926 IPR021820 GO:0004674
Stsc151041g00044 926 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 686 889 - -
Stsc151041g00044 926 Pfam S-locus glycoprotein domain 326 436 IPR000858 GO:0048544
Stsc151041g00044 926 Gene3D - 135 265 IPR036426 -
Stsc151041g00044 926 SUPERFAMILY alpha-D-mannose-specific plant lectins 190 299 IPR036426 -
Stsc151041g00044 926 ProSitePatterns EF-hand calcium-binding domain. 77 89 IPR018247 -
Stsc151041g00044 926 Gene3D Phosphorylase Kinase; domain 1 585 685 - -
Stsc151041g00044 926 ProSiteProfiles EF-hand calcium-binding domain profile. 64 99 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00044 Stsc-Chr151041 287401 292255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00044 544 895 Receptor kinase-like Gene Family AT4G23230 53.425 1.29e-122 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00044 PK_Tyr_Ser-Thr 9.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00044 - - cave:132173746 1068.91