Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00032 ATGAAGAACTTTCACCGTTTTGTCCCAATCATTCTCCACCTTTTTCTCGGTTTTCTTCTCTCCAAAACCATATCTGCAACTGATATATTAACTCAATTTCAGTCTCTAAGTGATAACCAAACATTAGTTTCCAAGAATGGAGACTTTGAACTTGGTTTCTTCACTCTTGATAACTCTACCAATTATTACCTTGGCATTTGGTACAAGAACATCCCAATCAGAACCATTGTATGGGTTGCAAATCGTGAAAACCCCTCCACAGATCACAACTCTGTTGTGTTGCTGATACACAACACAGAAAATAACACAATTCTCCTTACTCAGAACAATAAAAACACTGTTCTATGGTCTGTGAGTATATCAAGAAAACCCAAGAATCCAATTCTACAGCTCTTGGATTCAGGGAACCTTGTTCTGAGAGAAGAAAATGATGATGAGAATGAAGAGAAGAACTATCTATGGCAAAGTTTTGATTACCCTGGTGATACTCTCTTGCCAGGGATGAAGGTTGGGAAGGATTTAAGGACTGGTTTCGATAGGCGCGTAACGGCTTGGAAGAATGACAATGATCCTTCACCAGGAACCTTGAATTGGTTTATGGAGGTTACCAATTGGCCTGAACCGATGCAGAGAATTGGAACAATGAAGCAGTACAATAGTGGTCCTTGGAATGGAGTCCAATACAGTGGGAAACCAACCAACAAGCCTAGCCCGGCTTTCGAGTTCGTCTACTTTGCTGATGAGAGCCAAGTTTATTACATGTTTAAACTTGTTAACAACTCTGTCAAAGCTAGGATGGTGTTGAACCAAACCACAAACAAGATTCTGCAACTTGTGTGGACACAAGGTGTTTGGAAGATGTATGGTTCCATGCCAAGGGATTTTTGTGATGAGTATGGTGCTTGTGGTCCTAATGGGAAATGTGACATGGCTGAGTCTCCAAATACCTGTGAATGTTTGAGAGGGTATAGGCCTAAGTCACCAAAAGAATGGAGTGGAATGAACTATGAAGGAGGTTGCTTGCGCGACAAGCCACTGAATTGCGAAGGCGATGGGTTTATCAAGTATGTTAACATGAAAGTGCCTGATACTGAGAATTGTTGGTACTTGAATCAGAGCATGAGCTTGGCTGAGTGCAGAGATGAGTGCTTGAGTAATTGTTCTTGTATGGCCTATGTGAATTCGGATATTCGAGGAGAAGGCATTGGTTGTGCTTTGTGGTTTGGAGATCTTAATGATTTGAGGGTTCAACCAAGTGCAGGTCAAGATCTTTATGTTAGAGTTCCTGCTTCCGAGTTAGAGACAAGCAATGGAAGCAAGGTCAAGATAGGAATTGCAGTTGGATGCACTATTATTGTTGTATTATGCAGCTTGCTCTTAGTTCTCTACTTCACTTACATTAAAAGAAGAAGTGGCAAGAGAAGAAGGAATGCAGCAATAATGGATAGTTTCATTGAAGAACAAGAGGGGAACCTAGAGCTTCCATTGTTTGATCTATCAAGCTTAGCTAATGCCACTGGTAACTTCTCAATCAATAATAAGGTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGATTATTGAGAAATGGGCAACAAATTGCTGTGAAAAGACTTTCCAGAGGCTCTGTACAAGGGCTCAAAGAATTCAAAAATGAAATTGCTCTCATTGTCAAACTTCAACATCGTAATCTTGTGAAGCTTCATGGATGCTGCATTCACAATGAAGAGAAACTGCTTGTATATGAATACATGCCCAACAAAAGTTTGGATTTCTTCATATTTGATCAAACGCAGAGAAAGCTCTTAGATTGGTCGAAGTGCTTCCATATGATTTTGGGGATTGCGAAGGGGCTCCTTTATCTTCATCGGGATTCAAGACTTAGAATCATTCACAGAGATCTTAAAGCAAGTAATATCTTACTTGATAACGAAATGAATCCCAAGATATCAGATTTCGGCATGGCTAGAATTTTGGGAGGAGACCAAATTACAGCAACAACGCGACGAGTGGTTGGAACATAG 2025 0.4049 MKNFHRFVPIILHLFLGFLLSKTISATDILTQFQSLSDNQTLVSKNGDFELGFFTLDNSTNYYLGIWYKNIPIRTIVWVANRENPSTDHNSVVLLIHNTENNTILLTQNNKNTVLWSVSISRKPKNPILQLLDSGNLVLREENDDENEEKNYLWQSFDYPGDTLLPGMKVGKDLRTGFDRRVTAWKNDNDPSPGTLNWFMEVTNWPEPMQRIGTMKQYNSGPWNGVQYSGKPTNKPSPAFEFVYFADESQVYYMFKLVNNSVKARMVLNQTTNKILQLVWTQGVWKMYGSMPRDFCDEYGACGPNGKCDMAESPNTCECLRGYRPKSPKEWSGMNYEGGCLRDKPLNCEGDGFIKYVNMKVPDTENCWYLNQSMSLAECRDECLSNCSCMAYVNSDIRGEGIGCALWFGDLNDLRVQPSAGQDLYVRVPASELETSNGSKVKIGIAVGCTIIVVLCSLLLVLYFTYIKRRSGKRRRNAAIMDSFIEEQEGNLELPLFDLSSLANATGNFSINNKVGEGGFGPVYKGLLRNGQQIAVKRLSRGSVQGLKEFKNEIALIVKLQHRNLVKLHGCCIHNEEKLLVYEYMPNKSLDFFIFDQTQRKLLDWSKCFHMILGIAKGLLYLHRDSRLRIIHRDLKASNILLDNEMNPKISDFGMARILGGDQITATTRRVVGT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00032 674 SUPERFAMILY Protein kinase-like (PK-like) 492 674 IPR011009 -
Stsc151041g00032 674 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Stsc151041g00032 674 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 585 674 - -
Stsc151041g00032 674 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 157 - -
Stsc151041g00032 674 CDD PAN_AP_plant 345 429 - -
Stsc151041g00032 674 ProSiteProfiles PAN/Apple domain profile. 348 429 IPR003609 -
Stsc151041g00032 674 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 584 - -
Stsc151041g00032 674 Pfam D-mannose binding lectin 75 186 IPR001480 -
Stsc151041g00032 674 SMART blect_4 33 160 IPR001480 -
Stsc151041g00032 674 SMART serkin_6 509 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00032 674 Pfam Protein tyrosine and serine/threonine kinase 510 661 IPR001245 GO:0004672|GO:0006468
Stsc151041g00032 674 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 191 IPR036426 -
Stsc151041g00032 674 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Stsc151041g00032 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Stsc151041g00032 674 CDD B_lectin 34 160 IPR001480 -
Stsc151041g00032 674 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 665 - -
Stsc151041g00032 674 Pfam PAN-like domain 348 414 IPR003609 -
Stsc151041g00032 674 Gene3D Phosphorylase Kinase; domain 1 469 584 - -
Stsc151041g00032 674 ProSiteProfiles Protein kinase domain profile. 509 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00032 674 Gene3D Transferase(Phosphotransferase) domain 1 585 674 - -
Stsc151041g00032 674 ProSiteProfiles EGF-like domain profile. 292 329 IPR000742 -
Stsc151041g00032 674 Gene3D - 21 157 IPR036426 -
Stsc151041g00032 674 SMART ntp_6 348 428 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00032 Stsc-Chr151041 215334 217739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00032 428 674 Receptor kinase-like Gene Family AT4G05200 51.417 1.00e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00032 PK_Tyr_Ser-Thr 3.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00032 - - aip:107610641 1265.37