Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00031 ATGGCACCAGAATATGCAATAGACGGGAACTTCTCAGTGAAATCTGATATCTTTAGCTTTGGCATTTTGTTGCTAGAGATACTATCCGGAAAGAAAAACAAAGTAAATCATTGGGAAAATGAAAGCCCATACCTTATTGGCTATGCATGGGATTTGTGGACTGAAGAAAGGCCTCTAGAAATGGTTGATGATATCCTAAAAGAGTCTTGTAATAACCTCTCTGAAGTATTGAGGTGCATTCAGATAAGTCTTCTTTGTTTGGAGCAACATCCATATGACAGACCAGACATGTCATCAGTGATTATGATGTTTGGTAGTGAAATTGCCTTGCCCAAGCCAAAGCAACCAGCTCTGTTTGTCGGAGAATATTCATATGATGATTTTGACAATGAATTAAGTATCACAGCTTTAGAAGCTAGATAA 423 0.3783 MAPEYAIDGNFSVKSDIFSFGILLLEILSGKKNKVNHWENESPYLIGYAWDLWTEERPLEMVDDILKESCNNLSEVLRCIQISLLCLEQHPYDRPDMSSVIMMFGSEIALPKPKQPALFVGEYSYDDFDNELSITALEAR 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00031 140 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Stsc151041g00031 140 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 122 - -
Stsc151041g00031 140 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00031 140 SUPERFAMILY Protein kinase-like (PK-like) 1 118 IPR011009 -
Stsc151041g00031 140 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00031 Stsc-Chr151041 214463 215246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00031 1 135 Receptor kinase-like Gene Family AT4G23140 45.985 3.54e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00031 PK_Tyr_Ser-Thr 1.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00031 - - aip:107610641 246.514