Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00027 ATGGAAACAATTCTAGTTCTTGTTCTTCTTCTTCTGGTGGCAGTTTCTTGCTCCTCTAATTCTAATTCATCTTCATCTTCTTCTTCTTCTGGGGTAAACAAAAATGATAGCAGGTCCCTTTGTAACCAGTACAGTAGAGTGTGCGGACCAAATGGGAACTGCGACGAGACACAAACTTGTATGTGCTTGGATGGTTTCACACCTAAGTCTCCGAATGAATTCGCTTACATGAACTCTAGACAGGGATGTGTAAGAAACAAGCCTTTGAATTGTAACACTGATGTGTTTGTTAGATACTCTTCGCTTAAAGACCCAAGTGGTGGTTATTCTCTGCCAAACCAAGAGGATTGCATGGCAAAATGCAAGAGCAACTGTTCTTGTATGGCCTATAAGGTAGTACTTGGGGGTGGATGCAAATTGTGGAATGGTGATTTGTTTGATGCTGTGTTGGTTAAGCAGGGTGGACAAGATTTTTATATTCGAATGCCAGCTTCGGAGGAACAAGGGATATCAACGGAACAGGGGCGAAACAAGGGAGTGGTGGTAGGAATAGTTCTTGGGAGCATTGTTGTTGTAATTTCCATGATAATTGCTTCATGCTACATGCTCAGGAAAAGAAGACCTTCAAAAGCACTGGAACACGTACGGATTGAGGAGATTGTTACTCATCACACCAATATACAGAAGGAAGATATGGGGCTTCCATTATTTGATCTGTCAAGAATAGCTATGGCCACTAATAATTTCTCCCCCAACAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTTTACAAGGGCATACTGGATGATGGACAAGAAATTGCTGTTAAGAGACTTTCAAGTAGTTCTGGACAGGGCTTAAATGAATTCAAAACTGAAGTAAAGCTAATAGCTAAACTTCAACATCGTAATCTTGTGAAGCTTTTCGGATGCTGCATTCAACAAGAGGAGAAATTGCTAATATATGAATACATGCCAAATAAAAGCTTGGACTATTTTATCTTTGATCATGAGCGAAGGAGTGCCTTAGATTGGTCTAAGCGCTTCAATATTATTAGAGGAATTGCTAAAGGTTTATTATATCTGCATCAAGATTCAAGATTGAGAATTATACATAGAGATCTTAAAACGAGTAATATTTTATTGGACACTAAGATGGAACCCAAAATATCAGACTTTGGTTTAGCTAGAAGTTTTGGAAGTAATGAAAGTAAAGCAAATACAAAAAAAGTCGTCGGAACTTTGTGA 1248 0.3894 METILVLVLLLLVAVSCSSNSNSSSSSSSSGVNKNDSRSLCNQYSRVCGPNGNCDETQTCMCLDGFTPKSPNEFAYMNSRQGCVRNKPLNCNTDVFVRYSSLKDPSGGYSLPNQEDCMAKCKSNCSCMAYKVVLGGGCKLWNGDLFDAVLVKQGGQDFYIRMPASEEQGISTEQGRNKGVVVGIVLGSIVVVISMIIASCYMLRKRRPSKALEHVRIEEIVTHHTNIQKEDMGLPLFDLSRIAMATNNFSPNNKLGEGGFGPVYKGILDDGQEIAVKRLSSSSGQGLNEFKTEVKLIAKLQHRNLVKLFGCCIQQEEKLLIYEYMPNKSLDYFIFDHERRSALDWSKRFNIIRGIAKGLLYLHQDSRLRIIHRDLKTSNILLDTKMEPKISDFGLARSFGSNESKANTKKVVGTL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00027 415 SMART serkin_6 249 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00027 415 Gene3D Phosphorylase Kinase; domain 1 209 324 - -
Stsc151041g00027 415 Pfam Protein kinase domain 252 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00027 415 SMART ntp_6 91 162 IPR003609 -
Stsc151041g00027 415 ProSiteProfiles Protein kinase domain profile. 249 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00027 415 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 325 415 - -
Stsc151041g00027 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Stsc151041g00027 415 Pfam PAN-like domain 91 147 IPR003609 -
Stsc151041g00027 415 CDD PAN_AP_plant 88 163 - -
Stsc151041g00027 415 SUPERFAMILY Protein kinase-like (PK-like) 232 414 IPR011009 -
Stsc151041g00027 415 Gene3D Transferase(Phosphotransferase) domain 1 325 415 - -
Stsc151041g00027 415 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 414 - -
Stsc151041g00027 415 ProSiteProfiles PAN/Apple domain profile. 91 163 IPR003609 -
Stsc151041g00027 415 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 213 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00027 Stsc-Chr151041 194053 195767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00027 174 414 Receptor kinase-like Gene Family AT4G05200 53.498 2.18e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00027 Pkinase 6.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00027 - - aip:107610641 525.398