Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00026 ATGGCTCCAGAATACGCCGTCAATGGAGAATTTTCGATAAAATCTGACGTATTTAGCTTTGGTATCTTGTTATTGGAGATTTTATCGGGAAGGAAAAATAAAAGATTATATTATACAAGTGACAATAACGATGGCTTATATGGAACTGCATGGGATTTATGGAAGCAAGGAAGGTCACTGGAGTTGATAGATGAATGCCTCAAAGAATCATGGAATGTGTGTGAAGTACAACGTTGTATTCACATTAGCCTCCTATGTGCACAGCAATATCCCCATGATAGACCAACCATGTCTTCTGTGGTTTTAATGTTGGGAAGTGAAATTGATTTGCCTCAGCCTAAAGCTCCTACATTTTTCATTTGTGAACCTTTTGATGGTTCAAGTTCCTCCACAACTTGTAAAAACGAATTAAGCATTACAGAGATGGAACCTCGATAA 438 0.3767 MAPEYAVNGEFSIKSDVFSFGILLLEILSGRKNKRLYYTSDNNDGLYGTAWDLWKQGRSLELIDECLKESWNVCEVQRCIHISLLCAQQYPHDRPTMSSVVLMLGSEIDLPQPKAPTFFICEPFDGSSSSTTCKNELSITEMEPR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00026 145 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00026 145 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 143 - -
Stsc151041g00026 145 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Stsc151041g00026 145 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Stsc151041g00026 145 SUPERFAMILY Protein kinase-like (PK-like) 1 125 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00026 Stsc-Chr151041 193414 193931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00026 1 145 Receptor kinase-like Gene Family AT4G23140 46.795 6.28e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00026 PK_Tyr_Ser-Thr 3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00026 - - aip:107610641 236.498