Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00025 ATGCCAAACTTCAATATTATTATACCAATTTTCACTTTCTACCTTCTTCTGTTTCCAATCTCCGAAACCATAGCAGAAACAGATAGCATCACTAACTTGCAGTCTCTAAGTAAAAACCAGACCTTAGTTTCCAACAATGGACAATTTCAACTTGGTTTCTTCACTCTTGATAACTCTACCAACCACTATTACCTTGGCATTTGGTACAAAAATATCCCAGGCCAAACCGTTGTATGGGTCGCAAACCGTGAAAATCCCGCCACAAAACCCAACTCTCTTCTCTTTATTTCAAACAACACACTTGTCCTTAGTCAAGACAGCAACACTGTTCTATGGTCTGTGAGCATAACAACAAAGCTAAGGAATCAAATTCTACAACTCTTGGATTCAGGGAACCTTGTTCTAAGAGAAGAGAATGAAGAGAATAAGTATCTATGGCAAAGCTTTGACTACCCTGGTGATACACTCTTGCCAGGGATGAAGCTTGGTAAGGATTTGAGGACGGGTTTCGATAGGCGCTTAACGGCGTGGAAGAACAACAAAGATCCTTCACCGGGAAGCTTGAGTTGGGAAATGGATGTGACTATATGGCCAGAACCAATGCAAAGAATAGGATCAACAAAACAGTTCAGCACTGGAGCTTGGATTGGACTAGACTATGGTAGCAAACCAACCAGACAGCACCTACTATATTTCAGTCTTGTTTACTTCTCCAACGAGGATGAAGTGTACTTCGCATTCAACCTTGTCAATAACTCCATTCCAGGGAGGATAGTGTTGGATCAAACCTCCTACAGGCGTCTCTATTTGGTTTGGATTGATTCTTACAAACAATGGTCGATCCTTAGTTCAATGCCAAGAGTCTTCTGTGAGAGATTTAGTGTTTGTGGTTCTAATTCCAATTGTGACTGGACCAAGTCCGGGGTTGAAGCTTGTGACTGTTTGAGAGGCTTTAGGCCTAATCGTGACGGAGGTTGCTTGCGCCACAATCCACTGAATTGCGAAAGCGATGGGTTTGTTAAGTATGTGAAGATGAAAGTGCCTGACACTGAGAATTGCTGGTACTTGAATCAGACCATGAACCTTGATGAGTGCAGGGAGAAATGCTTGAAGAATTGTTCTTGTACAGCTTATACAAATTCAGATGTTAGAGGTGAAGGTAGTGGTTGTGCTTTGTGGTCTGGTGATCTTTATGATCTGAGGATTTTACCAGATGCAGGCCAAGATTTGTACATTAGAGTGCCAGCTTCAGAGTTAGAGACAAACAATGGACGCATTCGCAAGATAGGAATTGCAGTTGGAATCACAATTGGAGTATTATGTGGTCTGCTCTTAGTTTACTGTTTGATATGGAAAAGAAGGAAAAGGAGCACTCTGAAAGCATTAATCGATCATTCCAAGGAAGAACAAGAGGAGGATCCTGAGGTCCCATTGTATGACCTATCAGTCATAGCTTCTTCAACTGATAACTTTTCAGACAAAAACAAGCTTGGTGAAGGTGGTTTTGGATCTGTGTTTAAGGGAACATTGGAAGATGGACAAAGAATTGCAGTTAAGAGGCTCTCTACCGGTTCTGGACAAGGGATCAAAGAATTCAAGAACGAGATTACATTAATCGCCAAACTTCAGCATCGTAATCTTGTCAAGCTGCAAGGATATTGCATTGAGAATAAAGAGAAAATACTTATATATGAATATATGCCTAATAAGAGCTTGGATTTCTTTATATTTGATCAAACCCAAAGAATGGTTTTGGATTGGCCTACAAGAATCAGCATAATTTGTGGGATAGCGAGAGGTCTTCTTTATCTTCATCAAGATTCAAAACTTACAGTTATTCACAGAGATCTTAAAGCAAGTAATGTTTTACTTGACGATGAGATGAATCCAAAGATCTCGGACTTCGGTTTAGCTCGAATTTTGGGAGGAGACCAGACCACAGAAATGACACTCCGTGTTGTTGGAACTTAG 1971 0.4069 MPNFNIIIPIFTFYLLLFPISETIAETDSITNLQSLSKNQTLVSNNGQFQLGFFTLDNSTNHYYLGIWYKNIPGQTVVWVANRENPATKPNSLLFISNNTLVLSQDSNTVLWSVSITTKLRNQILQLLDSGNLVLREENEENKYLWQSFDYPGDTLLPGMKLGKDLRTGFDRRLTAWKNNKDPSPGSLSWEMDVTIWPEPMQRIGSTKQFSTGAWIGLDYGSKPTRQHLLYFSLVYFSNEDEVYFAFNLVNNSIPGRIVLDQTSYRRLYLVWIDSYKQWSILSSMPRVFCERFSVCGSNSNCDWTKSGVEACDCLRGFRPNRDGGCLRHNPLNCESDGFVKYVKMKVPDTENCWYLNQTMNLDECREKCLKNCSCTAYTNSDVRGEGSGCALWSGDLYDLRILPDAGQDLYIRVPASELETNNGRIRKIGIAVGITIGVLCGLLLVYCLIWKRRKRSTLKALIDHSKEEQEEDPEVPLYDLSVIASSTDNFSDKNKLGEGGFGSVFKGTLEDGQRIAVKRLSTGSGQGIKEFKNEITLIAKLQHRNLVKLQGYCIENKEKILIYEYMPNKSLDFFIFDQTQRMVLDWPTRISIICGIARGLLYLHQDSKLTVIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTTEMTLRVVGT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00025 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Stsc151041g00025 656 ProSiteProfiles Protein kinase domain profile. 491 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00025 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Stsc151041g00025 656 SMART ntp_6 334 414 IPR003609 -
Stsc151041g00025 656 Pfam D-mannose binding lectin 76 178 IPR001480 -
Stsc151041g00025 656 Gene3D - 21 149 IPR036426 -
Stsc151041g00025 656 CDD B_lectin 34 152 IPR001480 -
Stsc151041g00025 656 Gene3D Phosphorylase Kinase; domain 1 452 566 - -
Stsc151041g00025 656 Pfam Protein kinase domain 492 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00025 656 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 183 IPR036426 -
Stsc151041g00025 656 Gene3D Transferase(Phosphotransferase) domain 1 567 656 - -
Stsc151041g00025 656 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Stsc151041g00025 656 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 647 - -
Stsc151041g00025 656 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Stsc151041g00025 656 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Stsc151041g00025 656 Pfam S-locus glycoprotein domain 210 321 IPR000858 GO:0048544
Stsc151041g00025 656 SUPERFAMILY Protein kinase-like (PK-like) 475 656 IPR011009 -
Stsc151041g00025 656 CDD PAN_AP_plant 331 415 - -
Stsc151041g00025 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 567 656 - -
Stsc151041g00025 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 456 566 - -
Stsc151041g00025 656 SMART blect_4 33 152 IPR001480 -
Stsc151041g00025 656 SMART serkin_6 491 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00025 656 Pfam PAN-like domain 334 400 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00025 Stsc-Chr151041 189376 191730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00025 412 656 Receptor kinase-like Gene Family AT4G05200 52.653 3.71e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00025 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00025 - - ahf:112769120 933.324