Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00024 ATGGAAACAGTTCTTGTTCTTGTTCTTTTTGTTCTTGTTCCCTACACCTACATGTTTGTGGCAGCTTCTTCCTCTAATGGCAGCACCATATGTGACCAATACAGTAGAGTGTGCGGACCAAACGGGAACTGCGATGAGAAAAAAACTTGTGTGTGTTTGGATGGTTTCACACCCAAGTCTCCAACTGATTATGCTTATTACTTGAACTTCACACAGGGATGTGTAAGAAACACACCTTTGAATTGTAACACTGATGTGTTTGTCACATATTCTGCGCTTAAAGAACCAAGTGGTGGTTATTCTCTGTCGAACCGAGAGGATTGCATGGGAAAATGCAAGAGCAACTGTTCTTGTGTGGCGTATATGGTAACTGTGGGTGGTGGATGCAAGTTCTGGAACGGTGATTTGTTTGATGTTAGGTTGGTGAAACAGGGTGGACAAGATCTTTATATTCGAATGGCAGCTTCAGAGGAACAAGGGAAAAAACAGGGGAGAAATGAGGGAGTGGTGGTGGGAATAGTTGTTGGGGGCATTCTTGTGATTTCCATCATAATTGCTTTGTGGTACATTCTCAAGAAAAGAACAGCTTCAAGAGCATTGGAAAATTTAAGGATTGGCGAGATTATTACTCATCACACCAATGTACAAAAGGAAGATATGGGGCTTCCATTATTTGATCTGTCAAGAATAGTTGTTGCCACTGATAATTTCTCTCCCAATAATAAGCTTGGAGAAGGTGGTTTTGGCCCTGTTTACAAGGGTATATTAGATGATGGACAACAAATTGCTGTTAAGAAGCTTTCAAGTAGTTCCGGACAAGGACTAAATGAATTCAAAACTGAAGTAAAGTTAATAGCTAAACTCCAGCATCGTAATCTTGTAAAGCTTTTGGGATGTTGCATTCAACAAGAGGAGAAATTGCTAATCTATGAATACATGCCTAATAAAAGCTTGGACTATTTTATCTTTGATGAAGTGCGAAAGAGTGTCTTAGACTGGTCTAAGCGCTTTAACATTATTACTGGAATCGCCAAAGGATTATTATATCTTCATCATGATTCAAGGTTGAGGATTATACATAGAGATCTTAAAACAAGTAATATTTTATTGGACAGTAAAATGGAACCGAAAATTTCAGACTTTGGTTTAGCTAGAAGTTTTGGAGGTGATCAAAATAAAGCAAATACAAATAGAATTGTCGGAACTTTGTAA 1212 0.3837 METVLVLVLFVLVPYTYMFVAASSSNGSTICDQYSRVCGPNGNCDEKKTCVCLDGFTPKSPTDYAYYLNFTQGCVRNTPLNCNTDVFVTYSALKEPSGGYSLSNREDCMGKCKSNCSCVAYMVTVGGGCKFWNGDLFDVRLVKQGGQDLYIRMAASEEQGKKQGRNEGVVVGIVVGGILVISIIIALWYILKKRTASRALENLRIGEIITHHTNVQKEDMGLPLFDLSRIVVATDNFSPNNKLGEGGFGPVYKGILDDGQQIAVKKLSSSSGQGLNEFKTEVKLIAKLQHRNLVKLLGCCIQQEEKLLIYEYMPNKSLDYFIFDEVRKSVLDWSKRFNIITGIAKGLLYLHHDSRLRIIHRDLKTSNILLDSKMEPKISDFGLARSFGGDQNKANTNRIVGTL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00024 403 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 202 312 - -
Stsc151041g00024 403 SUPERFAMILY Protein kinase-like (PK-like) 220 402 IPR011009 -
Stsc151041g00024 403 CDD PAN_AP_plant 78 154 - -
Stsc151041g00024 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Stsc151041g00024 403 Gene3D Phosphorylase Kinase; domain 1 199 312 - -
Stsc151041g00024 403 ProSiteProfiles PAN/Apple domain profile. 82 154 IPR003609 -
Stsc151041g00024 403 Pfam Protein kinase domain 240 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00024 403 ProSiteProfiles Protein kinase domain profile. 237 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00024 403 Gene3D Transferase(Phosphotransferase) domain 1 313 403 - -
Stsc151041g00024 403 Pfam PAN-like domain 82 139 IPR003609 -
Stsc151041g00024 403 SMART ntp_6 82 153 IPR003609 -
Stsc151041g00024 403 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 402 - -
Stsc151041g00024 403 SMART serkin_6 237 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00024 403 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 313 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00024 Stsc-Chr151041 179428 181513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00024 163 402 Receptor kinase-like Gene Family AT4G23190 52.500 9.76e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00024 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00024 - - aip:107610641 535.413