Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00023 ATGGCTCCGGAGTATGCTGTTATTGGACAATTTTCGATAAAATCCGATGTCTTTAGCTTTGGTATTTTACTACTTGAGATCGTGTCAGGAAAGAAAAACAGAAAATTATATTATGCAAGTGATGACAATAATGTTGTTAGCTTATATGGAAACGCATGGGATCTATGGAAGCAAGGAAGGTCACTGGAGTTGGTGGATGAATTCCTCAAAGATTCATGGAATGTTTGTGAAGTACAACGTTGTATTCACATTAGCCTCCTATGTGCACAACAATATCCCCATGATAGACCAACCATGTCTTCTGTGGTTTTAATGTTGGGAAGTGAAATTGATTTGCCTCAACCCAAAGCTCCTACATTTTTTATTTGTGAACCTTTTGATGGTTCAAGTTCCTCCACAACTTGTAAAAATGAATTAAGCATTACAGAGATGGAACCTCGATAG 444 0.3739 MAPEYAVIGQFSIKSDVFSFGILLLEIVSGKKNRKLYYASDDNNVVSLYGNAWDLWKQGRSLELVDEFLKDSWNVCEVQRCIHISLLCAQQYPHDRPTMSSVVLMLGSEIDLPQPKAPTFFICEPFDGSSSSTTCKNELSITEMEPR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00023 147 SUPERFAMILY Protein kinase-like (PK-like) 1 127 IPR011009 -
Stsc151041g00023 147 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 145 - -
Stsc151041g00023 147 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Stsc151041g00023 147 Pfam Protein tyrosine and serine/threonine kinase 1 80 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00023 Stsc-Chr151041 178772 179316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00023 1 147 Receptor kinase-like Gene Family AT3G45860 44.937 1.16e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00023 PK_Tyr_Ser-Thr 3.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00023 - - aip:107610641 236.113