Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00021 ATGGCACCGGAATATGCCAGTGATGGGCTCTTTTCAGTAAAATCTGATGTTTTTAGCTTCGGTGTTTTGCTGCTGGAGATCATATCTGGGAAGAGAAGTAGAGGATACTACAATCAAAATACAAGCCACAATCTCTTTGGCCATGCATGGAAACTGTGGAAGGAAGAAATACCACTAGAACTAGTTGATACAAAGCTAGGAGATTGTTCTTTTCAATCACAAATATTGCATTGCATTCATGTTAGTCTCTTGTGTGTTCAACATGATCCAGAGGACAGGCCTGGAATGTCATCTGTTCTGATAATGTTAGTGAGTGAGTTTGAATTGCCTGAGCCAAAACAGCCAGGTTTCTTTGCAAAAGATTCAGGGGAAGCAGATTCATCCACAAGTAACATGCAACTGAGTTCAACAAATGAAATAACCATTACCCTTTTAGAAGCCAGATGA 447 0.4004 MAPEYASDGLFSVKSDVFSFGVLLLEIISGKRSRGYYNQNTSHNLFGHAWKLWKEEIPLELVDTKLGDCSFQSQILHCIHVSLLCVQHDPEDRPGMSSVLIMLVSEFELPEPKQPGFFAKDSGEADSSTSNMQLSSTNEITITLLEAR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00021 148 Pfam Domain of unknown function (DUF3403) 107 148 IPR021820 GO:0004674
Stsc151041g00021 148 Pfam Protein tyrosine and serine/threonine kinase 1 99 IPR001245 GO:0004672|GO:0006468
Stsc151041g00021 148 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Stsc151041g00021 148 SUPERFAMILY Protein kinase-like (PK-like) 1 118 IPR011009 -
Stsc151041g00021 148 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151041g00021 148 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00021 Stsc-Chr151041 168073 168637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00021 1 148 Receptor kinase-like Gene Family AT4G23150 42.581 4.25e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc151041g00021 PK_Tyr_Ser-Thr 8.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00021 - - gmx:100778155 249.98