Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00019 ATGTTTATTGAGGCTGTAGCATTTTGTGAAGATTCATTCATAGAAACAAGAAAGGAAGTTATTATAAGCATGGCAGAAGATCAATTTCAGGCAAGTGGCAACTGGTGGGAGAATCCAGCTATTAGGAACAATTGGCAACAACAACAAGAAGAATCAGATCACATCATCAAGCCAACAAGGGTTTCTTTGGATTCCTCCGTTGGCGGTGGCAGTGGCGGAGCCGGAGGTTCTCCTTCTGTGGTGTTTCATGACCCACAGAAGCTGCAACCTCCGGATTCCGCCGCCGCAACTTCTTCCACTGACCCCAACTTGCACTTTATGGCTTTAGGCCTCTCTTCTCCACCCATCGATTGGAATCAACAACCATCTTTCTTGCGTGGAGAAAAGGGTGGAGATAACAGCTTCAGAGCGATGCTACAGGAGGAGGGCGGCGGTGGCGGCGCCGCCATGGGGTTGTCAGCACAACAAGTTCATCAATGGAGATCCCCAGAAAACGAATTCAAGAACAACAGAGGGTTCTGTTTGGAGCAAAACCAATTCAGTCCTCAATATAGCTCTGGGGACAGCACAGTAACAAGCCAACAAGGATTTCATCATCATCATCACCAAAACATGGATCATTCTGCAGTTCTTTATGGTAGCCCTTCATCAATATTACAAGGACTATTAGGACCTGATCATCATCATCAACAACAACAACAAGCTAATCATCATAATACTAATTTTTCATCATATCATCCTACATCAAACTATGGGTTGAGTTCTTCTGGTAGCAATGAGTTTGTGCCTTCTTCATCTTCTTCTAATTGGTCTAATAATAATAATAATAAGGTGCCTCAGTTCTTGAGAGGCTCACCACCAAAACAGTTATCAAATTCTTCATCATCATCACCAATAACAACATCAAACACTAGCTTGCATTTCACCAACAACGCTCCCTTTTGGAACGCTGCTGCTGCTGCTACTGATTCTAAAGATGTTAGGTCTTCTTCTACCTTCTTCCCTAATTCATTGCAGCCACCATTCTTCACTGCTCCAAGCTTTGATGTCCAATCAAAGAATATGAGTGAAATGAGGGATTCAGGTGCAGTGGTGAAGAAAAGTGGTAGTGAGGGAACACCAAAAAGGCCTCGGAACGAAACTACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTTGGAAAGACTGATACAGCCTCAGTGTTATCTGAAGCAATTGAATACATCAAATTCCTCCATGAACAGGTCACTGTTTTGAGTACCCCGTATATGAAAAGTGGAGCTCCTATACAGATTCAACAGAGTTCTGGTAAATCTAAGGAAGGTGAGGGTCCAAAACAAGACCTTAGAAGCAGAGGGCTATGCTTGGTGCCAGTTTCAAGCACATTTCCAATGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTTGGAGGAGGATCAAGATAG 1503 0.4358 MFIEAVAFCEDSFIETRKEVIISMAEDQFQASGNWWENPAIRNNWQQQQEESDHIIKPTRVSLDSSVGGGSGGAGGSPSVVFHDPQKLQPPDSAAATSSTDPNLHFMALGLSSPPIDWNQQPSFLRGEKGGDNSFRAMLQEEGGGGGAAMGLSAQQVHQWRSPENEFKNNRGFCLEQNQFSPQYSSGDSTVTSQQGFHHHHHQNMDHSAVLYGSPSSILQGLLGPDHHHQQQQQANHHNTNFSSYHPTSNYGLSSSGSNEFVPSSSSSNWSNNNNNKVPQFLRGSPPKQLSNSSSSSPITTSNTSLHFTNNAPFWNAAAAATDSKDVRSSSTFFPNSLQPPFFTAPSFDVQSKNMSEMRDSGAVVKKSGSEGTPKRPRNETTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQIQQSSGKSKEGEGPKQDLRSRGLCLVPVSSTFPMTHETTVDFWTPTFGGGSR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00019 500 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 390 445 IPR036638 GO:0046983
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 179 203 - -
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 226 304 - -
Stsc151041g00019 500 CDD bHLH_AtbHLH_like 386 437 IPR045239 -
Stsc151041g00019 500 SMART finulus 391 435 IPR011598 GO:0046983
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 62 100 - -
Stsc151041g00019 500 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 380 429 IPR011598 GO:0046983
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 446 468 - -
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 179 198 - -
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 216 304 - -
Stsc151041g00019 500 MobiDBLite consensus disorder prediction 356 386 - -
Stsc151041g00019 500 Gene3D - 390 447 IPR036638 GO:0046983
Stsc151041g00019 500 FunFam Transcription factor bHLH123 family 390 452 - -
Stsc151041g00019 500 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 217 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00019 Stsc-Chr151041 151982 156501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00019 126 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.928 1.08e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00019 - - ahf:112772433 759.599