Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00004 ATGGAAGTGTTTATCATAACAAGCTTCCTCGTCCTCATCTTTGCGCTATTATTATGGCTTGCAAAGAAGGGTAAGAGTGGCCATAAAGTGCCACCCGGGCCATGGAAATTACCCATTATAGGGAACCTGCATCAACTTGTAGGCTCATCACTTCCACAACATGCTTTCAGGAAACTAGCAGAAAAACACGGTCCACTGATGCACCTTCAACTGGGTCAGATTTCAGCAGTGATTGTCTCATCTCCCAACATGGCCAGAGAAATTATGAAGACTCATGATCTTGCTTTTGCAGACAGGCCTGAGTTCCTTGCTTCCAAGATCACAGCCTATGGATCATCAGACATTGTATTCGCTCCCTATGGTGAATACTTGAGGCAGATGAGAAAGATATGCACACTTGAGCTTCTAAGTTCAAAGAAGGTTCACTCTTTCTCCTATATAAGACAAGAGGAGGTAGCTAACATGATAGAAACAATTTTCAAATCCGCTGGTGAAACCATCAATCTCAGTAAAATGATTAACAATCTCTTAAGCACTGTGGTTTCTAGAGCTATGTTTGGCAACTTATCTCAAGACCATGAACAGTTTGTGTCCTTTGTGAAGAAGTCAATAGCTTTATCCGACGGATTCGACCTTGCGGATTTGTTTCCTTCCTTCAAATCTCTCCATTTCATCACTGGTACGGAAGCCAAACTGTATAAGATGCATGTAAAGATGGACCAGATGTTAGACAAGATCATAAAGAAGAATGAAGAAAGGAAATTGGAATATAATACACAGCCAGAGCAAGAAGAAAAGAACGAGAATCTTATTGAGGTTCTTTTAAGAGTCCTACACAGTGGCACCCTTGACACCCCAATTACAATCAACAATGTCAAAGCCGTCATTATTGACATATTTGGTGGTGGAACAGATACTTCAGAAGTAGTTATAGAGTGGGTTATGTCGGAATTGATGAGAAATCCGAGAGCTATGAAGAAGGCACAGGCCGAGATTCGACATGCTTTGAGAGGAAAGCAAACAATCCGGGAGGCAGATGTAGCAGAGCTTCCCTACTTGAAGGCTGTGATCAGCGAAACAATGAGGTTACACCCTCCTTTTCCTCTGTTGGTTCCAAGACAAGCCAGACAAGACTGCACCATCGATGGATACCATATACCGATGAATACTAAAGTCATTGTAAATTCGTACGTGCTCGGAAGAGATCCAGATTACTGGCACGATGCAGAAAGCTTCCTACCAGAAAGGTTTCAGGACAATCCTATAGATTTCAAAGGGACAAACTTCGAGTACATTCCTTTTGGAGCAGGAAGGAGAATGTGTCCGGGGCTTAACTTTGGTTTGGCTAACGTAGAGTTTGCTCTGGCTATGCTACTCTACTACTTCAACTGGGAACTCCCTGAAGGAATTAAGCCACAGGATTTGGATATGAATGAAGCACGAGGAGCCATCGTTGGAAGGAAAAACAACCTTCACTTGATTCCCATTCCTTATCATAAATAA 1503 0.4238 MEVFIITSFLVLIFALLLWLAKKGKSGHKVPPGPWKLPIIGNLHQLVGSSLPQHAFRKLAEKHGPLMHLQLGQISAVIVSSPNMAREIMKTHDLAFADRPEFLASKITAYGSSDIVFAPYGEYLRQMRKICTLELLSSKKVHSFSYIRQEEVANMIETIFKSAGETINLSKMINNLLSTVVSRAMFGNLSQDHEQFVSFVKKSIALSDGFDLADLFPSFKSLHFITGTEAKLYKMHVKMDQMLDKIIKKNEERKLEYNTQPEQEEKNENLIEVLLRVLHSGTLDTPITINNVKAVIIDIFGGGTDTSEVVIEWVMSELMRNPRAMKKAQAEIRHALRGKQTIREADVAELPYLKAVISETMRLHPPFPLLVPRQARQDCTIDGYHIPMNTKVIVNSYVLGRDPDYWHDAESFLPERFQDNPIDFKGTNFEYIPFGAGRRMCPGLNFGLANVEFALAMLLYYFNWELPEGIKPQDLDMNEARGAIVGRKNNLHLIPIPYHK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00004 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 SUPERFAMILY Cytochrome P450 29 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 FunFam Cytochrome P450 71D8 23 495 - -
Stsc151041g00004 500 Gene3D Cytochrome P450 23 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PANTHER OS08G0105600 PROTEIN 54 499 - -
Stsc151041g00004 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00004 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Stsc151041g00004 500 CDD CYP71-like 62 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00004 Stsc-Chr151041 26167 27771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00004 9 498 Cytochrome P450 AT3G26300 40.358 2.71e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00004 - K15472 gmx:100800554 663.685