Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151041g00003 ATGGAAGTGTTTACCATAACAAGCTTCGTCATCCTCATCTTTGTGCTATTACTATGGCTTGCAAAGAAGGGTAAGAGTAAGAGTGTAAAAAAACTGCCACCTGGGCCATGGAAACTACCTATCATAGGGAACCTACATCAACTTGTAGGCTCATCACTTCCACAACATGCTTTCAGGAAACTAGCAGAAAAACACGGTCCACTGATGCACCTTCAACTGGGTGAGATTTCAGCATTGGTTGTCTCATCCCCCAACACGGCCAGAGAAATCATGAAGACTCATGATGTTGTTTTTGCACACAGGGCTGAGTTCATTACTACCAAAATCTTACTCTATGGAACAGCAAGCTTTGCGTTATCTCCCCTTGGTGATTACTGGAGGCAGATGAGAAAGATATGCACACTTGAGCTTCTTAGTCCAAAGAAGGTTCACTCTTTCTCCTATATAAGACAAGAGGAGGTAGCTAACATGGCAGAAAAAATTCGCATATCCGCTGGTGAAACCATCAATCTCAGTAAAATGATTGACAATCTCACAAGCACTGTGATTTCTAGAGTTTTGTTTGGCAACTTATCTGAAGAACGTGAACAGTTTGTGTCCTTTGTGAAGGAGTCAGCAGAGTTATCTGACGGATTTGCCCTTGAAGATTTGTTTCCTTCCTTCAAACCTTTGCATTTCATCTCTGGTATGGAAGGCAAACTGTATAAGATGCATGTCAAGTTGGACCAGATCTTAGACAAAATCATAAAGGAGAACCAAGAAAGGAATAAAGAGCCCAAGCAAGAAGATAAGAACGAGAATATTGTTGAGGTTCTTTTAAGACTCCTACACAGTGGCACCCTTGACACCCCAATTACAATGAACAATGTCAAAGCGGTCATTTTGGACATGTTTTTTGCTGGAACAGATACTTCAAGTGTAGTTGTAGAGTGGGCTATGTCAGAATTGATGAGAAGTCCGAGAGCTATGAAGAAGGCACAGGCCGAGATTCGACATGCTTTGAGAGGAAAGCAAACAATTCAGGAGGCAGATGTAGCAGAGCTTCCCTACTTGAAGGCTGTGATCAAGGAAACAATGAGGTTACACCCTCCTCTTCCTATGTTGCTTCCAAGAAAATCAAGCGAAGATTGCACCATCAACGGATACCATATACCAAAGAATACAAAAGTATTGGTAAATTTGCACGCGCTAGGAAGAGATCCAGATTACTGGTACGATGCAGAAAGCTTCCTACCAGAAAGGTTTCAGGAGAATCCTATGGATTTCAAAGGGACAAACTTGGAGTACATTCCTTTTGGAGCAGGAAGGAGAATGTGTCCGGGAATTAACTTTGGTTTAGTGAACGTTGAGTCTGCTCTTTCTATGCTACTCTACCGTTTCAACTGGGAACTCCCTAATGGAATGAAGCCAGAGGATTTGGATATGAATGAAACACGTGGAGCGTCCGGTGCAAGGAAAAACCACCTTCACTTGATTCCCACTCCTTACATTTATACTTAG 1500 0.4227 MEVFTITSFVILIFVLLLWLAKKGKSKSVKKLPPGPWKLPIIGNLHQLVGSSLPQHAFRKLAEKHGPLMHLQLGEISALVVSSPNTAREIMKTHDVVFAHRAEFITTKILLYGTASFALSPLGDYWRQMRKICTLELLSPKKVHSFSYIRQEEVANMAEKIRISAGETINLSKMIDNLTSTVISRVLFGNLSEEREQFVSFVKESAELSDGFALEDLFPSFKPLHFISGMEGKLYKMHVKLDQILDKIIKENQERNKEPKQEDKNENIVEVLLRLLHSGTLDTPITMNNVKAVILDMFFAGTDTSSVVVEWAMSELMRSPRAMKKAQAEIRHALRGKQTIQEADVAELPYLKAVIKETMRLHPPLPMLLPRKSSEDCTINGYHIPKNTKVLVNLHALGRDPDYWYDAESFLPERFQENPMDFKGTNLEYIPFGAGRRMCPGINFGLVNVESALSMLLYRFNWELPNGMKPEDLDMNETRGASGARKNHLHLIPTPYIYT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151041g00003 499 PANTHER OS08G0105600 PROTEIN 56 496 - -
Stsc151041g00003 499 Gene3D Cytochrome P450 25 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 CDD CYP71-like 64 489 - -
Stsc151041g00003 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 FunFam Cytochrome P450 99A2 22 494 - -
Stsc151041g00003 499 Pfam Cytochrome P450 33 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Stsc151041g00003 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151041g00003 499 SUPERFAMILY Cytochrome P450 30 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151041g00003 Stsc-Chr151041 13448 15103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151041g00003 12 497 Cytochrome P450 AT3G26300 40.040 8.55e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151041g00003 - K15472 gmx:100800554 611.683